Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 Y_RNA.245-201ENST00000364493 95 ntBASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 RNU6-952P-201ENST00000391164 108 ntBASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 AL033519.2-201ENST00000403958 392 ntBASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 AL139397.2-201ENST00000404529 772 ntBASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 RNU2-63P-201ENST00000410792 194 ntBASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 BX119904.4-201ENST00000424402 301 ntBASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 MTCO3P46-201ENST00000425787 232 ntBASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 FO393414.1-201ENST00000428697 1184 ntBASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 HMGN2P3-201ENST00000433603 273 ntBASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 HMGN2P5-201ENST00000436882 273 ntBASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 COX7BP2-201ENST00000437976 242 ntBASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 AL357134.1-201ENST00000445848 426 ntBASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 CECR9-201ENST00000453421 199 ntBASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 USP9YP10-201ENST00000454868 628 ntBASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 AC069528.1-202ENST00000482888 637 ntBASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 AC018437.1-201ENST00000492214 406 ntBASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 AC108210.2-201ENST00000503681 201 ntBASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 OR5AL2P-201ENST00000532185 920 ntBASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 AC110588.1-201ENST00000559699 137 ntBASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 AC079148.1-201ENST00000565944 819 ntBASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 AL078605.1-201ENST00000603529 500 ntBASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 AC126118.1-201ENST00000607744 628 ntBASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 DUSP12P1-201ENST00000612874 516 ntBASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 AC022202.1-201ENST00000613515 211 ntBASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV1-1A0A0B4J248 RNA5SP276-201ENST00000362580 94 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 RNU1-62P-201ENST00000362599 164 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 RNU6-223P-201ENST00000362830 107 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 Z98749.2-208ENST00000381646 500 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 AL079342.2-201ENST00000403367 482 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 RNU6-516P-201ENST00000411381 104 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 BTF3P8-201ENST00000414577 526 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 MTND4P6-201ENST00000438297 472 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 HMGB1P18-201ENST00000438801 619 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 DNAJC19P4-201ENST00000440115 345 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 AC009238.1-201ENST00000442165 424 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 AL096829.2-201ENST00000446582 742 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 RPL23AP6-201ENST00000446637 472 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 AC009237.6-201ENST00000446969 424 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 AC079776.3-201ENST00000450665 370 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 AMD1P1-201ENST00000457220 922 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 RPS29P23-201ENST00000458635 123 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 RNU7-136P-201ENST00000458819 69 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 RPL23AP63-201ENST00000498752 471 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 AC026414.1-201ENST00000504046 698 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 HMGB1P28-201ENST00000507778 552 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 AC008628.1-201ENST00000508663 265 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 MTCYBP16-201ENST00000509187 1129 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 AC117522.2-201ENST00000510049 657 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 MRPS36P5-201ENST00000551909 298 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 AL160236.1-201ENST00000556317 195 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 MIR4285-201ENST00000581001 85 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 BNIP3P23-201ENST00000599655 511 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 AC104763.2-201ENST00000604179 382 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 AL583856.2-201ENST00000606298 543 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 AC093673.2-201ENST00000609674 331 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 MIR5739-201ENST00000619803 80 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 CDR1-202ENST00000625883 1485 ntBASIC1.18□□□□□ -2.22
TRAV1-1A0A0B4J248 RNU6-236P-201ENST00000363886 106 ntBASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 U3.13-201ENST00000364804 214 ntBASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 RNU6-468P-201ENST00000384003 109 ntBASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 RNU6-19P-201ENST00000384718 107 ntBASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 MIR934-201ENST00000401241 83 ntBASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 AL356421.1-201ENST00000403255 413 ntBASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 MIR1304-201ENST00000408243 91 ntBASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 RNU6-955P-201ENST00000410497 104 ntBASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 USP9YP6-201ENST00000413550 854 ntBASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 USP9YP26-201ENST00000421008 661 ntBASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 MTCO1P3-201ENST00000429327 192 ntBASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms