Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SNX9Q9Y5X1 RNA5SP383-201ENST00000362934 120 ntBASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 SNORA36C-201ENST00000384289 132 ntBASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 SNORA1.3-201ENST00000384676 136 ntBASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 RNU6-606P-201ENST00000384721 111 ntBASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 FGF7P8-201ENST00000402994 292 ntBASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 AC114491.1-201ENST00000416095 246 ntBASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 MRPL50P2-201ENST00000416821 482 ntBASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 GTF2IP20-201ENST00000431663 360 ntBASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 AC016691.1-201ENST00000441321 413 ntBASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 RPS12P18-201ENST00000442381 270 ntBASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 CACYBPP2-201ENST00000453625 678 ntBASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 AL356010.1-201ENST00000456364 102 ntBASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 AC022364.2-201ENST00000457963 554 ntBASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 RPS29P2-201ENST00000479278 136 ntBASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 PRDX4P1-201ENST00000507189 574 ntBASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 RNU6-1281P-201ENST00000516223 105 ntBASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 OR5BN1P-201ENST00000532955 829 ntBASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 AC034105.3-201ENST00000565294 442 ntBASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 AC008536.2-201ENST00000607284 349 ntBASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 DUXAP9-208ENST00000622815 614 ntBASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 FER-210ENST00000628534 558 ntTSL 5 BASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SNX9Q9Y5X1 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 RNU6-188P-201ENST00000364207 107 ntBASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 SNORA14A-201ENST00000364773 135 ntBASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 Y_RNA.295-201ENST00000364918 102 ntBASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 RNU4-48P-201ENST00000365559 182 ntBASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 RPS4XP3-201ENST00000398541 413 ntBASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 RPL5P18-201ENST00000406671 891 ntBASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 RNA5SP38-201ENST00000410750 119 ntBASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 Z92545.1-201ENST00000411782 234 ntBASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 OR51A5P-201ENST00000415429 942 ntBASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 AC093151.1-201ENST00000427711 313 ntBASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 AC093106.2-201ENST00000428212 385 ntBASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 AC024082.2-201ENST00000434771 238 ntBASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 AL353572.1-201ENST00000442490 417 ntBASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 AL590664.1-201ENST00000448065 339 ntBASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 S100A11P2-201ENST00000467589 312 ntBASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 AC074344.1-201ENST00000512823 224 ntBASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 RNU7-51P-201ENST00000516560 62 ntBASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 AP001646.1-201ENST00000527936 915 ntBASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 OR4R1P-201ENST00000529879 463 ntBASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 MIR4775-201ENST00000581168 75 ntBASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 AC008752.3-201ENST00000588113 712 ntBASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 AC106900.2-201ENST00000604994 317 ntBASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 AC099654.14-201ENST00000638599 341 ntBASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SNX9Q9Y5X1 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 AC006020.1-201ENST00000420179 1854 ntBASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 SNORA69-201ENST00000383895 132 ntBASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 MIR454-201ENST00000390180 115 ntBASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 AL591416.1-201ENST00000404015 867 ntBASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 RNU2-39P-201ENST00000410604 198 ntBASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 RPL30P16-201ENST00000419341 429 ntBASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 AC018630.2-202ENST00000422992 927 ntBASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SNX9Q9Y5X1 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms