Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 AC015917.1-201ENST00000579654 510 ntBASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 AL139276.1-201ENST00000311910 1001 ntBASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 CD24P4-201ENST00000382840 243 ntBASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 RNU6-140P-201ENST00000384566 108 ntBASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 Y_RNA.534-201ENST00000384599 112 ntBASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 AC063979.1-201ENST00000415539 377 ntBASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 AL139413.1-201ENST00000421309 217 ntBASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 MTND4LP11-201ENST00000422184 280 ntBASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 AC012498.1-201ENST00000424037 437 ntBASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 HMGB3P11-201ENST00000440127 604 ntBASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 MTND3P16-201ENST00000452205 344 ntBASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 SCARNA18-201ENST00000459004 134 ntBASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 AC093663.1-201ENST00000497190 394 ntBASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 AC116353.2-201ENST00000505332 712 ntBASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 AL137161.1-201ENST00000532231 390 ntBASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 BNIP3P6-201ENST00000549284 499 ntBASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 AC004805.2-201ENST00000605382 482 ntBASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 MIR92B-201ENST00000607575 96 ntBASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 MIR7975-201ENST00000619350 68 ntBASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 SNORD39.4-201ENST00000620099 78 ntBASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 AC009033.1-201ENST00000624279 431 ntBASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
CLDN16Q9Y5I7 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 RNU6-799P-201ENST00000363567 107 ntBASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 RNU1-33P-201ENST00000364249 162 ntBASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 RNU6-876P-201ENST00000391295 104 ntBASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 RNU2-68P-201ENST00000410878 191 ntBASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 RNU6-193P-201ENST00000410977 107 ntBASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 RNU6-373P-201ENST00000411247 98 ntBASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 AC097713.2-201ENST00000430199 356 ntBASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 RPL23AP69-201ENST00000431134 458 ntBASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 AL591704.1-201ENST00000432574 275 ntBASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 HMGB1P31-201ENST00000437242 427 ntBASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 RNU7-180P-201ENST00000459240 63 ntBASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 AL135752.1-201ENST00000479477 471 ntBASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 RPL21P99-201ENST00000480369 423 ntBASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 AC026784.1-201ENST00000507986 352 ntBASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 AC006445.2-201ENST00000510061 472 ntBASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 AC025465.4-201ENST00000513422 638 ntBASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 AC005476.1-201ENST00000554427 397 ntBASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 AC136601.2-201ENST00000604356 474 ntBASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 RMST_3.1-201ENST00000611651 109 ntBASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 AC032011.1-201ENST00000611703 1549 ntBASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN16Q9Y5I7 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.21□□□□□ -1.89
CLDN16Q9Y5I7 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
CLDN16Q9Y5I7 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CLDN16Q9Y5I7 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLDN16Q9Y5I7 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.21□□□□□ -1.9
CLDN16Q9Y5I7 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CLDN16Q9Y5I7 CEP170P1-201ENST00000502249 4587 ntBASIC3.21□□□□□ -1.9
CLDN16Q9Y5I7 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLDN16Q9Y5I7 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CLDN16Q9Y5I7 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CLDN16Q9Y5I7 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.21□□□□□ -1.9
CLDN16Q9Y5I7 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.21□□□□□ -1.9
CLDN16Q9Y5I7 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.21□□□□□ -1.9
CLDN16Q9Y5I7 AC092047.1-201ENST00000424997 240 ntBASIC3.21□□□□□ -1.9
CLDN16Q9Y5I7 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.21□□□□□ -1.9
CLDN16Q9Y5I7 YME1L1P1-201ENST00000429435 297 ntBASIC3.21□□□□□ -1.9
CLDN16Q9Y5I7 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CLDN16Q9Y5I7 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.21□□□□□ -1.9
CLDN16Q9Y5I7 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.21□□□□□ -1.9
CLDN16Q9Y5I7 AL121601.2-201ENST00000438019 707 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms