Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 Y_RNA.691-201ENST00000516611 103 ntBASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 RNU6-1282P-201ENST00000516735 96 ntBASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 AC105029.1-201ENST00000520250 669 ntBASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 CYCSP27-201ENST00000527643 293 ntBASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 AC026464.5-201ENST00000562497 722 ntBASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 AC005668.1-201ENST00000571142 476 ntBASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 AC053481.4-201ENST00000583164 216 ntBASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 AC022149.2-201ENST00000621061 203 ntBASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 MTND4P29-201ENST00000503122 1372 ntBASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 RNU6-254P-201ENST00000363377 107 ntBASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 RNU6-395P-201ENST00000365662 106 ntBASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 Y_RNA.480-201ENST00000384364 102 ntBASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 MIR578-201ENST00000384828 96 ntBASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 AL445189.1-201ENST00000405722 338 ntBASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 RPL23AP69-201ENST00000431134 458 ntBASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 HMGB1P18-201ENST00000438801 619 ntBASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 AL360271.2-201ENST00000447710 161 ntBASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 RPL23AP62-201ENST00000463396 453 ntBASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 AP002812.1-201ENST00000495378 474 ntBASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 AC008716.1-201ENST00000511084 513 ntBASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 SNORA19.2-201ENST00000516013 114 ntBASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 RNU1-61P-201ENST00000516107 151 ntBASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 RNU2-27P-201ENST00000516185 142 ntBASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 RNU6-1069P-201ENST00000516612 133 ntBASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 NDUFB9P3-201ENST00000521269 501 ntBASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 AP000763.2-201ENST00000540641 163 ntBASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 AC026333.2-201ENST00000542164 106 ntBASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 AL157871.3-201ENST00000557231 293 ntBASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 TGIF1P1-201ENST00000558095 802 ntBASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 AC243960.4-201ENST00000600532 288 ntBASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 AC136601.2-201ENST00000604356 474 ntBASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 DUSP12P1-201ENST00000612874 516 ntBASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 AC112487.2-201ENST00000637950 304 ntBASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDHA3Q9Y5H8 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 MIR30E-201ENST00000362104 92 ntBASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 Y_RNA.33-201ENST00000362591 102 ntBASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 RNU4-73P-201ENST00000363164 141 ntBASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 AP002088.1-201ENST00000382740 395 ntBASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 Y_RNA.509-201ENST00000384506 99 ntBASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 YPEL5P1-201ENST00000419731 367 ntBASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 AL158156.1-201ENST00000422509 473 ntBASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 UBE2D3P2-201ENST00000424409 445 ntBASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 MTND4P28-201ENST00000426217 387 ntBASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 RPL7P2-201ENST00000427639 268 ntBASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 HMGB3P11-201ENST00000440127 604 ntBASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 UBE2V1P7-201ENST00000446395 340 ntBASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 AC092001.1-201ENST00000453012 261 ntBASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 PPP1R2P5-201ENST00000457256 603 ntBASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 RN7SL132P-201ENST00000478131 296 ntBASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 AC110768.1-201ENST00000509222 400 ntBASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 AP000889.2-201ENST00000532684 490 ntBASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 AC011602.1-201ENST00000546484 331 ntBASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms