Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.48□□□□□ -2.01
FOXA2Q9Y261 BMS1P22-201ENST00000414726 313 ntBASIC2.48□□□□□ -2.01
FOXA2Q9Y261 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.48□□□□□ -2.01
FOXA2Q9Y261 MTATP6P17-201ENST00000431030 672 ntBASIC2.48□□□□□ -2.01
FOXA2Q9Y261 Z98742.2-201ENST00000431564 187 ntBASIC2.48□□□□□ -2.01
FOXA2Q9Y261 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.48□□□□□ -2.01
FOXA2Q9Y261 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.48□□□□□ -2.01
FOXA2Q9Y261 MTND1P26-201ENST00000440488 538 ntBASIC2.48□□□□□ -2.01
FOXA2Q9Y261 AL022238.1-201ENST00000442557 355 ntBASIC2.48□□□□□ -2.01
FOXA2Q9Y261 GAPDHP17-201ENST00000449858 1001 ntBASIC2.48□□□□□ -2.01
FOXA2Q9Y261 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.48□□□□□ -2.01
FOXA2Q9Y261 SNORD42A-201ENST00000459584 64 ntBASIC2.48□□□□□ -2.01
FOXA2Q9Y261 AP001324.2-201ENST00000461163 319 ntBASIC2.48□□□□□ -2.01
FOXA2Q9Y261 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.48□□□□□ -2.01
FOXA2Q9Y261 RN7SL633P-201ENST00000488974 297 ntBASIC2.48□□□□□ -2.01
FOXA2Q9Y261 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.48□□□□□ -2.01
FOXA2Q9Y261 AC116655.1-201ENST00000508324 901 ntBASIC2.48□□□□□ -2.01
FOXA2Q9Y261 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.48□□□□□ -2.01
FOXA2Q9Y261 SCARNA24.1-201ENST00000516465 137 ntBASIC2.48□□□□□ -2.01
FOXA2Q9Y261 AC007536.1-201ENST00000533382 349 ntBASIC2.48□□□□□ -2.01
FOXA2Q9Y261 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.48□□□□□ -2.01
FOXA2Q9Y261 AC012414.6-201ENST00000568241 401 ntBASIC2.48□□□□□ -2.01
FOXA2Q9Y261 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.48□□□□□ -2.01
FOXA2Q9Y261 AL645944.1-201ENST00000603857 493 ntBASIC2.48□□□□□ -2.01
FOXA2Q9Y261 AP000787.2-201ENST00000604432 568 ntBASIC2.48□□□□□ -2.01
FOXA2Q9Y261 AC090578.1-201ENST00000604955 591 ntBASIC2.48□□□□□ -2.01
FOXA2Q9Y261 MIR98-201ENST00000606724 119 ntBASIC2.48□□□□□ -2.01
FOXA2Q9Y261 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.48□□□□□ -2.01
FOXA2Q9Y261 AC096577.2-201ENST00000611455 153 ntBASIC2.48□□□□□ -2.01
FOXA2Q9Y261 AC073114.1-201ENST00000612027 490 ntBASIC2.48□□□□□ -2.01
FOXA2Q9Y261 AL157786.1-207ENST00000627771 695 ntBASIC2.48□□□□□ -2.01
FOXA2Q9Y261 MIR7157-201ENST00000635801 60 ntBASIC2.48□□□□□ -2.01
FOXA2Q9Y261 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
FOXA2Q9Y261 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.48□□□□□ -2.01
FOXA2Q9Y261 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.48□□□□□ -2.01
FOXA2Q9Y261 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.48□□□□□ -2.01
FOXA2Q9Y261 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.47□□□□□ -2.01
FOXA2Q9Y261 AC073346.2-201ENST00000624724 2058 ntBASIC2.47□□□□□ -2.01
FOXA2Q9Y261 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.47□□□□□ -2.01
FOXA2Q9Y261 Y_RNA.201-201ENST00000364052 96 ntBASIC2.47□□□□□ -2.01
FOXA2Q9Y261 RNU6-169P-201ENST00000365336 107 ntBASIC2.47□□□□□ -2.01
FOXA2Q9Y261 SNORA7.4-201ENST00000384249 137 ntBASIC2.47□□□□□ -2.01
FOXA2Q9Y261 SNORD15B-201ENST00000384714 146 ntBASIC2.47□□□□□ -2.01
FOXA2Q9Y261 AL160275.3-201ENST00000423876 471 ntBASIC2.47□□□□□ -2.01
FOXA2Q9Y261 AC009961.2-201ENST00000435771 251 ntBASIC2.47□□□□□ -2.01
FOXA2Q9Y261 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.47□□□□□ -2.01
FOXA2Q9Y261 RPS27AP8-201ENST00000452665 445 ntBASIC2.47□□□□□ -2.01
FOXA2Q9Y261 AL583843.1-201ENST00000456070 346 ntBASIC2.47□□□□□ -2.01
FOXA2Q9Y261 RN7SL20P-201ENST00000488827 297 ntBASIC2.47□□□□□ -2.01
FOXA2Q9Y261 AIG1P1-201ENST00000503376 148 ntBASIC2.47□□□□□ -2.01
FOXA2Q9Y261 FAM92A1P2-202ENST00000504766 877 ntBASIC2.47□□□□□ -2.01
FOXA2Q9Y261 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
FOXA2Q9Y261 AC116562.3-201ENST00000506136 177 ntBASIC2.47□□□□□ -2.01
FOXA2Q9Y261 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.47□□□□□ -2.01
FOXA2Q9Y261 SNORA18.6-201ENST00000516792 115 ntBASIC2.47□□□□□ -2.01
FOXA2Q9Y261 ACA59.2-201ENST00000517061 156 ntBASIC2.47□□□□□ -2.01
FOXA2Q9Y261 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.47□□□□□ -2.01
FOXA2Q9Y261 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.47□□□□□ -2.01
FOXA2Q9Y261 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.47□□□□□ -2.01
FOXA2Q9Y261 AC068587.5-201ENST00000528506 175 ntBASIC2.47□□□□□ -2.01
FOXA2Q9Y261 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.47□□□□□ -2.01
FOXA2Q9Y261 AC074050.1-201ENST00000563247 211 ntBASIC2.47□□□□□ -2.01
FOXA2Q9Y261 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.47□□□□□ -2.01
FOXA2Q9Y261 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.47□□□□□ -2.01
FOXA2Q9Y261 MIR5004-201ENST00000579078 107 ntBASIC2.47□□□□□ -2.01
FOXA2Q9Y261 AC012493.2-201ENST00000595083 291 ntBASIC2.47□□□□□ -2.01
FOXA2Q9Y261 DEFB131E-202ENST00000602581 683 ntBASIC2.47□□□□□ -2.01
FOXA2Q9Y261 Z99497.2-201ENST00000603634 310 ntBASIC2.47□□□□□ -2.01
FOXA2Q9Y261 AL121992.2-201ENST00000606262 256 ntBASIC2.47□□□□□ -2.01
FOXA2Q9Y261 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.47□□□□□ -2.01
FOXA2Q9Y261 AL359854.1-201ENST00000614203 1594 ntBASIC2.47□□□□□ -2.01
FOXA2Q9Y261 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
FOXA2Q9Y261 AL035425.3-201ENST00000564206 4996 ntBASIC2.47□□□□□ -2.01
FOXA2Q9Y261 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
FOXA2Q9Y261 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.46□□□□□ -2.02
FOXA2Q9Y261 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.46□□□□□ -2.02
FOXA2Q9Y261 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
FOXA2Q9Y261 Y_RNA.22-201ENST00000362492 102 ntBASIC2.46□□□□□ -2.02
FOXA2Q9Y261 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.46□□□□□ -2.02
FOXA2Q9Y261 RNU6-748P-201ENST00000384648 107 ntBASIC2.46□□□□□ -2.02
FOXA2Q9Y261 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.46□□□□□ -2.02
FOXA2Q9Y261 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
FOXA2Q9Y261 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.46□□□□□ -2.02
FOXA2Q9Y261 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.46□□□□□ -2.02
FOXA2Q9Y261 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.46□□□□□ -2.02
FOXA2Q9Y261 SDCBPP3-201ENST00000419629 891 ntBASIC2.46□□□□□ -2.02
FOXA2Q9Y261 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.46□□□□□ -2.02
FOXA2Q9Y261 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.46□□□□□ -2.02
FOXA2Q9Y261 AC006946.1-201ENST00000429106 328 ntBASIC2.46□□□□□ -2.02
FOXA2Q9Y261 MYL8P-204ENST00000431574 518 ntBASIC2.46□□□□□ -2.02
FOXA2Q9Y261 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
FOXA2Q9Y261 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.46□□□□□ -2.02
FOXA2Q9Y261 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.46□□□□□ -2.02
FOXA2Q9Y261 MTND1P27-201ENST00000451117 902 ntBASIC2.46□□□□□ -2.02
FOXA2Q9Y261 BX510359.1-201ENST00000456973 237 ntBASIC2.46□□□□□ -2.02
FOXA2Q9Y261 AC090096.1-201ENST00000489168 390 ntBASIC2.46□□□□□ -2.02
FOXA2Q9Y261 RPL22P13-201ENST00000493291 347 ntBASIC2.46□□□□□ -2.02
FOXA2Q9Y261 RN7SL504P-201ENST00000494496 287 ntBASIC2.46□□□□□ -2.02
FOXA2Q9Y261 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
FOXA2Q9Y261 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms