Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 RNU6-777P-201ENST00000364265 104 ntBASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 MIR676-201ENST00000390702 67 ntBASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 RNU2-68P-201ENST00000410878 191 ntBASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 RNA5SP270-201ENST00000411361 118 ntBASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 AL445685.2-201ENST00000422551 342 ntBASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 AL953862.1-201ENST00000423016 168 ntBASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 AL353729.1-201ENST00000425044 720 ntBASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 NANOGP2-201ENST00000435391 727 ntBASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 AC004383.1-201ENST00000438135 289 ntBASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 AC016691.1-201ENST00000441321 413 ntBASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 EEF1E1P1-201ENST00000446998 430 ntBASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 MTND5P30-201ENST00000452896 1731 ntBASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 AP001324.2-201ENST00000461163 319 ntBASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 AC034222.1-201ENST00000494052 532 ntBASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 AC106872.3-201ENST00000495104 446 ntBASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 AC091965.2-201ENST00000512324 613 ntBASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 AC110760.3-202ENST00000515177 371 ntBASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 RNU6-703P-201ENST00000516946 107 ntBASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 AP003168.1-201ENST00000530091 307 ntBASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 AC010928.2-201ENST00000588017 287 ntBASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 DUSP12P1-201ENST00000612874 516 ntBASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 uc_338.14-201ENST00000613162 166 ntBASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 OR1S1-201ENST00000624470 978 ntBASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
HHLA3Q9XRX5 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 AL359854.1-201ENST00000614203 1594 ntBASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 SNORD48-201ENST00000364953 64 ntBASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 RNA5SP126-201ENST00000365092 109 ntBASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 RNA5SP88-201ENST00000365560 109 ntBASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 RN7SKP158-201ENST00000410453 326 ntBASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 AIMP1P2-201ENST00000425294 312 ntBASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 AC244035.1-201ENST00000430042 390 ntBASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 FABP5P13-201ENST00000452144 328 ntBASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 FABP5P15-201ENST00000453566 214 ntBASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 MEMO1P3-201ENST00000459811 302 ntBASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 MTAPP1-201ENST00000489154 819 ntBASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 RPS29P21-201ENST00000496272 170 ntBASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 AC092436.1-201ENST00000506450 503 ntBASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 AC113347.3-201ENST00000509113 148 ntBASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 AC024589.1-201ENST00000512207 263 ntBASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 RNU2-19P-201ENST00000517288 84 ntBASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 RANP3-201ENST00000530970 276 ntBASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 AL121821.2-201ENST00000556081 394 ntBASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 AC060771.1-201ENST00000582031 164 ntBASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 AC073544.2-201ENST00000601155 540 ntBASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 AC005034.5-201ENST00000604219 466 ntBASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 AL138963.2-201ENST00000605137 226 ntBASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 RPL21P136-201ENST00000605378 396 ntBASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 AC112220.2-201ENST00000605513 533 ntBASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 AC068276.1-201ENST00000605793 379 ntBASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 AC087241.4-201ENST00000612441 480 ntBASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 AC123767.1-202ENST00000620407 817 ntBASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 AL390862.1-201ENST00000635467 1469 ntBASIC1.35□□□□□ -2.19
HHLA3Q9XRX5 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
HHLA3Q9XRX5 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.34□□□□□ -2.19
HHLA3Q9XRX5 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.34□□□□□ -2.19
HHLA3Q9XRX5 ZNF355P-201ENST00000427301 3216 ntBASIC1.34□□□□□ -2.19
HHLA3Q9XRX5 RNU1-72P-201ENST00000362976 153 ntBASIC1.34□□□□□ -2.19
HHLA3Q9XRX5 RNU6-486P-201ENST00000363116 107 ntBASIC1.34□□□□□ -2.19
HHLA3Q9XRX5 RNU6-658P-201ENST00000384606 106 ntBASIC1.34□□□□□ -2.19
HHLA3Q9XRX5 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.34□□□□□ -2.19
HHLA3Q9XRX5 RNU2-2P-201ENST00000410396 191 ntBASIC1.34□□□□□ -2.19
HHLA3Q9XRX5 RNU2-20P-201ENST00000410425 191 ntBASIC1.34□□□□□ -2.19
HHLA3Q9XRX5 RPL21P24-201ENST00000413752 448 ntBASIC1.34□□□□□ -2.19
HHLA3Q9XRX5 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.34□□□□□ -2.19
HHLA3Q9XRX5 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.34□□□□□ -2.19
HHLA3Q9XRX5 GTF2IP3-201ENST00000433887 494 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms