Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.6□□□□□ -1.99
SMC3Q9UQE7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.6□□□□□ -1.99
SMC3Q9UQE7 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.6□□□□□ -1.99
SMC3Q9UQE7 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.6□□□□□ -1.99
SMC3Q9UQE7 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.6□□□□□ -1.99
SMC3Q9UQE7 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.6□□□□□ -1.99
SMC3Q9UQE7 UBE2FP3-201ENST00000436366 524 ntBASIC2.6□□□□□ -1.99
SMC3Q9UQE7 AL008629.1-201ENST00000438615 184 ntBASIC2.6□□□□□ -1.99
SMC3Q9UQE7 ELOCP30-201ENST00000447108 299 ntBASIC2.6□□□□□ -1.99
SMC3Q9UQE7 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.6□□□□□ -1.99
SMC3Q9UQE7 PSPHP1-201ENST00000450062 261 ntBASIC2.6□□□□□ -1.99
SMC3Q9UQE7 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.6□□□□□ -1.99
SMC3Q9UQE7 RNU7-59P-201ENST00000459101 61 ntBASIC2.6□□□□□ -1.99
SMC3Q9UQE7 AC068587.2-201ENST00000478386 781 ntBASIC2.6□□□□□ -1.99
SMC3Q9UQE7 RPS27P21-201ENST00000486977 252 ntBASIC2.6□□□□□ -1.99
SMC3Q9UQE7 AC098591.2-201ENST00000510152 315 ntBASIC2.6□□□□□ -1.99
SMC3Q9UQE7 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.6□□□□□ -1.99
SMC3Q9UQE7 AC087276.1-201ENST00000529659 480 ntBASIC2.6□□□□□ -1.99
SMC3Q9UQE7 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.6□□□□□ -1.99
SMC3Q9UQE7 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.6□□□□□ -1.99
SMC3Q9UQE7 AC007038.2-201ENST00000608095 740 ntBASIC2.6□□□□□ -1.99
SMC3Q9UQE7 AL031667.3-201ENST00000620124 655 ntBASIC2.6□□□□□ -1.99
SMC3Q9UQE7 AC009831.4-201ENST00000620744 325 ntBASIC2.6□□□□□ -1.99
SMC3Q9UQE7 AC131159.1-201ENST00000621854 213 ntBASIC2.6□□□□□ -1.99
SMC3Q9UQE7 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
SMC3Q9UQE7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SMC3Q9UQE7 AC104454.1-201ENST00000421341 1401 ntBASIC2.59□□□□□ -1.99
SMC3Q9UQE7 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
SMC3Q9UQE7 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SMC3Q9UQE7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SMC3Q9UQE7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SMC3Q9UQE7 U3.12-201ENST00000364498 214 ntBASIC2.59□□□□□ -1.99
SMC3Q9UQE7 SNORA67.4-201ENST00000384688 142 ntBASIC2.59□□□□□ -1.99
SMC3Q9UQE7 RNU6-253P-201ENST00000384730 105 ntBASIC2.59□□□□□ -1.99
SMC3Q9UQE7 MIR19A-201ENST00000384878 82 ntBASIC2.59□□□□□ -1.99
SMC3Q9UQE7 MTCYBP36-201ENST00000404146 440 ntBASIC2.59□□□□□ -1.99
SMC3Q9UQE7 U3.40-201ENST00000408706 208 ntBASIC2.59□□□□□ -1.99
SMC3Q9UQE7 RPL21P24-201ENST00000413752 448 ntBASIC2.59□□□□□ -1.99
SMC3Q9UQE7 HMGB1P11-201ENST00000413899 637 ntBASIC2.59□□□□□ -1.99
SMC3Q9UQE7 BPY2DP-201ENST00000422208 265 ntBASIC2.59□□□□□ -1.99
SMC3Q9UQE7 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.59□□□□□ -1.99
SMC3Q9UQE7 GPM6BP3-201ENST00000442797 145 ntBASIC2.59□□□□□ -1.99
SMC3Q9UQE7 GDI2P2-201ENST00000445131 608 ntBASIC2.59□□□□□ -1.99
SMC3Q9UQE7 EEF1B2P7-201ENST00000451177 676 ntBASIC2.59□□□□□ -1.99
SMC3Q9UQE7 ZNF114P1-201ENST00000453500 292 ntBASIC2.59□□□□□ -1.99
SMC3Q9UQE7 ART2BP-201ENST00000453501 499 ntBASIC2.59□□□□□ -1.99
SMC3Q9UQE7 AL160314.1-201ENST00000490836 438 ntBASIC2.59□□□□□ -1.99
SMC3Q9UQE7 AC105252.1-201ENST00000503089 286 ntBASIC2.59□□□□□ -1.99
SMC3Q9UQE7 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.59□□□□□ -1.99
SMC3Q9UQE7 RNU6-1129P-201ENST00000515964 104 ntBASIC2.59□□□□□ -1.99
SMC3Q9UQE7 AP005902.1-201ENST00000521358 186 ntBASIC2.59□□□□□ -1.99
SMC3Q9UQE7 AP003461.1-201ENST00000528866 78 ntBASIC2.59□□□□□ -1.99
SMC3Q9UQE7 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
SMC3Q9UQE7 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
SMC3Q9UQE7 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.59□□□□□ -1.99
SMC3Q9UQE7 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.59□□□□□ -1.99
SMC3Q9UQE7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.59□□□□□ -1.99
SMC3Q9UQE7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.59□□□□□ -1.99
SMC3Q9UQE7 AC135628.1-201ENST00000568867 534 ntBASIC2.59□□□□□ -1.99
SMC3Q9UQE7 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.59□□□□□ -1.99
SMC3Q9UQE7 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.59□□□□□ -1.99
SMC3Q9UQE7 AC068790.3-201ENST00000602988 553 ntBASIC2.59□□□□□ -1.99
SMC3Q9UQE7 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.59□□□□□ -1.99
SMC3Q9UQE7 AC107294.1-201ENST00000609524 467 ntBASIC2.59□□□□□ -1.99
SMC3Q9UQE7 AL031601.2-202ENST00000622650 282 ntBASIC2.59□□□□□ -1.99
SMC3Q9UQE7 AC091965.5-201ENST00000624785 342 ntBASIC2.59□□□□□ -1.99
SMC3Q9UQE7 AC097655.1-201ENST00000635075 318 ntBASIC2.59□□□□□ -1.99
SMC3Q9UQE7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.59□□□□□ -1.99
SMC3Q9UQE7 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
SMC3Q9UQE7 AC080128.1-201ENST00000474389 1917 ntBASIC2.59□□□□□ -1.99
SMC3Q9UQE7 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
SMC3Q9UQE7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.59□□□□□ -2
SMC3Q9UQE7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
SMC3Q9UQE7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
SMC3Q9UQE7 CKAP2P1-201ENST00000555477 2049 ntBASIC2.58□□□□□ -2
SMC3Q9UQE7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.58□□□□□ -2
SMC3Q9UQE7 Y_RNA.18-201ENST00000362461 102 ntBASIC2.58□□□□□ -2
SMC3Q9UQE7 Y_RNA.111-201ENST00000363248 100 ntBASIC2.58□□□□□ -2
SMC3Q9UQE7 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
SMC3Q9UQE7 MIR221-201ENST00000385135 110 ntBASIC2.58□□□□□ -2
SMC3Q9UQE7 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.58□□□□□ -2
SMC3Q9UQE7 VPS26BP1-201ENST00000417155 755 ntBASIC2.58□□□□□ -2
SMC3Q9UQE7 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.58□□□□□ -2
SMC3Q9UQE7 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.58□□□□□ -2
SMC3Q9UQE7 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.58□□□□□ -2
SMC3Q9UQE7 HMGN2P38-201ENST00000423806 265 ntBASIC2.58□□□□□ -2
SMC3Q9UQE7 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.58□□□□□ -2
SMC3Q9UQE7 RPL7P34-201ENST00000433316 712 ntBASIC2.58□□□□□ -2
SMC3Q9UQE7 AL031659.1-201ENST00000447075 539 ntBASIC2.58□□□□□ -2
SMC3Q9UQE7 MTATP6P7-201ENST00000453315 681 ntBASIC2.58□□□□□ -2
SMC3Q9UQE7 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.58□□□□□ -2
SMC3Q9UQE7 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.58□□□□□ -2
SMC3Q9UQE7 AC072039.1-201ENST00000477611 581 ntBASIC2.58□□□□□ -2
SMC3Q9UQE7 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.58□□□□□ -2
SMC3Q9UQE7 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.58□□□□□ -2
SMC3Q9UQE7 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.58□□□□□ -2
SMC3Q9UQE7 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.58□□□□□ -2
SMC3Q9UQE7 RNA5SP281-201ENST00000516504 135 ntBASIC2.58□□□□□ -2
SMC3Q9UQE7 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.58□□□□□ -2
SMC3Q9UQE7 DUXAP5-201ENST00000529668 529 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms