Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AC245054.1-201ENST00000420944 258 ntBASIC3.51□□□□□ -1.85
VPS4AQ9UN37 RPL31P12-201ENST00000422587 358 ntBASIC3.51□□□□□ -1.85
VPS4AQ9UN37 AC006989.1-201ENST00000427212 131 ntBASIC3.51□□□□□ -1.85
VPS4AQ9UN37 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.51□□□□□ -1.85
VPS4AQ9UN37 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.51□□□□□ -1.85
VPS4AQ9UN37 RN7SL601P-201ENST00000471221 293 ntBASIC3.51□□□□□ -1.85
VPS4AQ9UN37 AP002884.2-201ENST00000471647 395 ntBASIC3.51□□□□□ -1.85
VPS4AQ9UN37 AC012181.1-201ENST00000479895 423 ntBASIC3.51□□□□□ -1.85
VPS4AQ9UN37 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.51□□□□□ -1.85
VPS4AQ9UN37 AL049874.1-201ENST00000489560 388 ntBASIC3.51□□□□□ -1.85
VPS4AQ9UN37 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.51□□□□□ -1.85
VPS4AQ9UN37 APOOP4-201ENST00000513530 597 ntBASIC3.51□□□□□ -1.85
VPS4AQ9UN37 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.51□□□□□ -1.85
VPS4AQ9UN37 RNU6-1314P-201ENST00000517139 104 ntBASIC3.51□□□□□ -1.85
VPS4AQ9UN37 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.51□□□□□ -1.85
VPS4AQ9UN37 RAB11AP2-201ENST00000545905 639 ntBASIC3.51□□□□□ -1.85
VPS4AQ9UN37 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.51□□□□□ -1.85
VPS4AQ9UN37 MIR5583-1-201ENST00000580941 59 ntBASIC3.51□□□□□ -1.85
VPS4AQ9UN37 MIR5187-201ENST00000583479 76 ntBASIC3.51□□□□□ -1.85
VPS4AQ9UN37 MIR3922-201ENST00000585192 84 ntBASIC3.51□□□□□ -1.85
VPS4AQ9UN37 AC022893.3-201ENST00000607665 437 ntBASIC3.51□□□□□ -1.85
VPS4AQ9UN37 RMST_8.1-201ENST00000610287 165 ntBASIC3.51□□□□□ -1.85
VPS4AQ9UN37 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.51□□□□□ -1.85
VPS4AQ9UN37 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS4AQ9UN37 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS4AQ9UN37 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS4AQ9UN37 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS4AQ9UN37 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS4AQ9UN37 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VPS4AQ9UN37 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VPS4AQ9UN37 MTND4P14-201ENST00000435799 1354 ntBASIC3.51□□□□□ -1.85
VPS4AQ9UN37 HSPA8P4-201ENST00000511877 1920 ntBASIC3.5□□□□□ -1.85
VPS4AQ9UN37 AL079305.1-201ENST00000623159 3008 ntBASIC3.5□□□□□ -1.85
VPS4AQ9UN37 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS4AQ9UN37 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VPS4AQ9UN37 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
VPS4AQ9UN37 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS4AQ9UN37 Y_RNA.100-201ENST00000363141 102 ntBASIC3.5□□□□□ -1.85
VPS4AQ9UN37 Y_RNA.263-201ENST00000364659 114 ntBASIC3.5□□□□□ -1.85
VPS4AQ9UN37 RNU6-283P-201ENST00000364788 107 ntBASIC3.5□□□□□ -1.85
VPS4AQ9UN37 RNA5SP267-201ENST00000364893 126 ntBASIC3.5□□□□□ -1.85
VPS4AQ9UN37 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS4AQ9UN37 Y_RNA.399-201ENST00000383955 105 ntBASIC3.5□□□□□ -1.85
VPS4AQ9UN37 RNU6-190P-201ENST00000384154 102 ntBASIC3.5□□□□□ -1.85
VPS4AQ9UN37 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS4AQ9UN37 EEF1A1P40-201ENST00000412883 573 ntBASIC3.5□□□□□ -1.85
VPS4AQ9UN37 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS4AQ9UN37 AC104058.1-201ENST00000448028 297 ntBASIC3.5□□□□□ -1.85
VPS4AQ9UN37 RPS3AP46-201ENST00000448352 682 ntBASIC3.5□□□□□ -1.85
VPS4AQ9UN37 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS4AQ9UN37 BX510359.1-201ENST00000456973 237 ntBASIC3.5□□□□□ -1.85
VPS4AQ9UN37 RPL21P93-201ENST00000480465 489 ntBASIC3.5□□□□□ -1.85
VPS4AQ9UN37 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS4AQ9UN37 FAM206BP-201ENST00000510179 541 ntBASIC3.5□□□□□ -1.85
VPS4AQ9UN37 LRRC34P2-201ENST00000514850 553 ntBASIC3.5□□□□□ -1.85
VPS4AQ9UN37 RN7SKP57-201ENST00000517248 293 ntBASIC3.5□□□□□ -1.85
VPS4AQ9UN37 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.5□□□□□ -1.85
VPS4AQ9UN37 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS4AQ9UN37 OR11H5P-201ENST00000554039 926 ntBASIC3.5□□□□□ -1.85
VPS4AQ9UN37 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS4AQ9UN37 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS4AQ9UN37 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS4AQ9UN37 AL138889.2-201ENST00000603883 242 ntBASIC3.5□□□□□ -1.85
VPS4AQ9UN37 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.5□□□□□ -1.85
VPS4AQ9UN37 AP002826.1-201ENST00000608835 315 ntBASIC3.5□□□□□ -1.85
VPS4AQ9UN37 AC009570.1-201ENST00000609599 745 ntBASIC3.5□□□□□ -1.85
VPS4AQ9UN37 AC099778.2-201ENST00000610904 211 ntBASIC3.5□□□□□ -1.85
VPS4AQ9UN37 AC063943.3-201ENST00000615562 356 ntBASIC3.5□□□□□ -1.85
VPS4AQ9UN37 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS4AQ9UN37 MIR3651-201ENST00000630427 90 ntBASIC3.5□□□□□ -1.85
VPS4AQ9UN37 AC100810.6-201ENST00000638068 285 ntBASIC3.5□□□□□ -1.85
VPS4AQ9UN37 AC093010.3-201ENST00000570269 15214 ntBASIC3.5□□□□□ -1.85
VPS4AQ9UN37 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VPS4AQ9UN37 MTND4P35-201ENST00000604257 1375 ntBASIC3.5□□□□□ -1.85
VPS4AQ9UN37 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
VPS4AQ9UN37 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.49□□□□□ -1.85
VPS4AQ9UN37 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
VPS4AQ9UN37 AC005183.1-201ENST00000603687 1979 ntBASIC3.49□□□□□ -1.85
VPS4AQ9UN37 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.49□□□□□ -1.85
VPS4AQ9UN37 AC091152.2-201ENST00000591628 2569 ntBASIC3.49□□□□□ -1.85
VPS4AQ9UN37 PWAR6-201ENST00000552334 4618 ntBASIC3.49□□□□□ -1.85
VPS4AQ9UN37 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VPS4AQ9UN37 SNORD37.1-201ENST00000390968 65 ntBASIC3.49□□□□□ -1.85
VPS4AQ9UN37 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS4AQ9UN37 AC002075.2-201ENST00000425207 252 ntBASIC3.49□□□□□ -1.85
VPS4AQ9UN37 AL669831.1-202ENST00000428504 417 ntBASIC3.49□□□□□ -1.85
VPS4AQ9UN37 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS4AQ9UN37 AL591212.2-201ENST00000433923 257 ntBASIC3.49□□□□□ -1.85
VPS4AQ9UN37 SETP5-201ENST00000437270 562 ntBASIC3.49□□□□□ -1.85
VPS4AQ9UN37 GTF2IP13-201ENST00000438487 386 ntBASIC3.49□□□□□ -1.85
VPS4AQ9UN37 RPS29P31-201ENST00000446147 164 ntBASIC3.49□□□□□ -1.85
VPS4AQ9UN37 RPS15AP27-201ENST00000449183 343 ntBASIC3.49□□□□□ -1.85
VPS4AQ9UN37 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.49□□□□□ -1.85
VPS4AQ9UN37 SCARNA18-201ENST00000459004 134 ntBASIC3.49□□□□□ -1.85
VPS4AQ9UN37 RNU7-66P-201ENST00000459469 62 ntBASIC3.49□□□□□ -1.85
VPS4AQ9UN37 RNU6-1208P-201ENST00000459588 107 ntBASIC3.49□□□□□ -1.85
VPS4AQ9UN37 Y_RNA.654-201ENST00000497848 106 ntBASIC3.49□□□□□ -1.85
VPS4AQ9UN37 HMGB3P15-201ENST00000507326 574 ntBASIC3.49□□□□□ -1.85
VPS4AQ9UN37 FGF7P4-201ENST00000509595 295 ntBASIC3.49□□□□□ -1.85
VPS4AQ9UN37 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms