Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 AC004057.1-201ENST00000485827 348 ntBASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 RPL36AP41-201ENST00000493820 306 ntBASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 AC105758.1-201ENST00000506038 399 ntBASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 RNA5SP154-201ENST00000516193 111 ntBASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 Y_RNA.668-201ENST00000516233 93 ntBASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 SNORA31.8-201ENST00000516327 108 ntBASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-1256P-201ENST00000516539 103 ntBASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 AC023632.4-201ENST00000517783 191 ntBASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 MYL12BP1-201ENST00000569826 507 ntBASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 AC090425.1-201ENST00000610007 140 ntBASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 AL445567.2-201ENST00000618935 498 ntBASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 AL022401.1-201ENST00000619498 108 ntBASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 NOL8P1-201ENST00000508336 3529 ntBASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 AC009643.2-201ENST00000603543 1448 ntBASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 AL136164.3-201ENST00000624429 3978 ntBASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 RNY1P16-201ENST00000363063 111 ntBASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 Y_RNA.245-201ENST00000364493 95 ntBASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 RNU4-42P-201ENST00000364738 142 ntBASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 Y_RNA.314-201ENST00000365114 102 ntBASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 Y_RNA.424-201ENST00000384063 103 ntBASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-1222P-201ENST00000384615 107 ntBASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 MIR554-201ENST00000384874 96 ntBASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 NUP35P1-201ENST00000422734 947 ntBASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 PHBP16-201ENST00000446318 950 ntBASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 AC079168.2-201ENST00000453977 416 ntBASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 snoU13.4-201ENST00000458916 104 ntBASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 RPL21P126-201ENST00000470049 478 ntBASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 RPL22P13-201ENST00000493291 347 ntBASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 AC093852.1-201ENST00000503587 266 ntBASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 PARP4P3-201ENST00000510265 317 ntBASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 NDUFB4P9-201ENST00000511646 388 ntBASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-709P-201ENST00000517257 104 ntBASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 AP000827.1-201ENST00000527814 258 ntBASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 MIR4273-201ENST00000582824 84 ntBASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.79□□□□□ -1.8
CDC42EP3Q9UKI2 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-37P-201ENST00000362692 107 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 RNA5SP502-201ENST00000362694 119 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 Y_RNA.48-201ENST00000362710 103 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-11P-201ENST00000364234 107 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-7-201ENST00000364784 107 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-8-201ENST00000365467 107 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 SNORD14.1-201ENST00000365609 90 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-25P-201ENST00000383873 107 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-1-201ENST00000383898 107 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-48P-201ENST00000384161 107 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-36P-201ENST00000384172 107 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-1181P-201ENST00000384191 106 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-4P-201ENST00000384205 107 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-5P-201ENST00000384238 107 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-3P-201ENST00000384314 107 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-16P-201ENST00000384385 107 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-15P-201ENST00000384534 107 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-2-201ENST00000384627 107 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-29P-201ENST00000384637 107 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-9-201ENST00000384776 107 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-33P-201ENST00000384793 107 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 RNA5SP171-201ENST00000391071 115 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 RN7SKP202-201ENST00000410439 330 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 Y_RNA.623-201ENST00000411128 95 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 RPL23AP26-201ENST00000412728 464 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 AL117339.3-201ENST00000418733 162 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 RPL27AP8-201ENST00000424277 446 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 AL627311.1-201ENST00000431514 115 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 AC073910.1-201ENST00000445047 438 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 AC105137.1-201ENST00000484355 562 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms