Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 MIR148B-201ENST00000362252 99 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 RNU1-140P-201ENST00000365040 165 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 RNU6-701P-201ENST00000384059 107 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 SNORA24.1-201ENST00000384401 135 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 UBE2V1P2-201ENST00000397758 440 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 OR9R1P-201ENST00000412200 877 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 AC114491.1-201ENST00000416095 246 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 MTCYBP8-201ENST00000422855 651 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.19□□□□□ -1.9
SIX4Q9UIU6 AL139132.1-201ENST00000431587 344 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 DDX3P2-201ENST00000446138 111 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.19□□□□□ -1.9
SIX4Q9UIU6 MLLT10P2-201ENST00000506434 249 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 AC117522.1-201ENST00000509821 380 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 RNU6-358P-201ENST00000516564 75 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 RN7SKP272-201ENST00000516988 232 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 RNU6-840P-201ENST00000517275 65 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 OR5AL2P-201ENST00000532185 920 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 OR5BN1P-201ENST00000532955 829 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SIX4Q9UIU6 HIF1AP1-201ENST00000553642 175 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.19□□□□□ -1.9
SIX4Q9UIU6 H3F3AP1-201ENST00000559984 334 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.19□□□□□ -1.9
SIX4Q9UIU6 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.19□□□□□ -1.9
SIX4Q9UIU6 AC060780.3-201ENST00000589464 80 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 BNIP3P30-201ENST00000601184 574 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.19□□□□□ -1.9
SIX4Q9UIU6 AC008945.2-201ENST00000606056 604 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 AC022306.2-201ENST00000617563 647 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 U6.42-201ENST00000618440 107 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 AL589994.2-201ENST00000621124 579 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 AL360181.4-201ENST00000621752 134 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 SNORA50A-202ENST00000629536 136 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 AC024614.3-201ENST00000637860 256 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.19□□□□□ -1.9
SIX4Q9UIU6 CASC19-280ENST00000642102 1351 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
SIX4Q9UIU6 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.19□□□□□ -1.9
SIX4Q9UIU6 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SIX4Q9UIU6 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.19□□□□□ -1.9
SIX4Q9UIU6 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.19□□□□□ -1.9
SIX4Q9UIU6 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SIX4Q9UIU6 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SIX4Q9UIU6 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SIX4Q9UIU6 RNU6-960P-201ENST00000364056 120 ntBASIC3.18□□□□□ -1.9
SIX4Q9UIU6 RNU5E-4P-201ENST00000364931 120 ntBASIC3.18□□□□□ -1.9
SIX4Q9UIU6 RNU6-996P-201ENST00000365438 107 ntBASIC3.18□□□□□ -1.9
SIX4Q9UIU6 SNORA36C-201ENST00000384289 132 ntBASIC3.18□□□□□ -1.9
SIX4Q9UIU6 RNU6-876P-201ENST00000391295 104 ntBASIC3.18□□□□□ -1.9
SIX4Q9UIU6 NDUFS5P1-201ENST00000405668 289 ntBASIC3.18□□□□□ -1.9
SIX4Q9UIU6 AL354719.1-201ENST00000406535 843 ntBASIC3.18□□□□□ -1.9
SIX4Q9UIU6 Z92545.1-201ENST00000411782 234 ntBASIC3.18□□□□□ -1.9
SIX4Q9UIU6 AC245054.2-201ENST00000415639 319 ntBASIC3.18□□□□□ -1.9
SIX4Q9UIU6 ZNF90P2-204ENST00000419323 1075 ntBASIC3.18□□□□□ -1.9
SIX4Q9UIU6 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.18□□□□□ -1.9
SIX4Q9UIU6 RAC1P6-201ENST00000423911 575 ntBASIC3.18□□□□□ -1.9
SIX4Q9UIU6 DUTP6-201ENST00000425573 462 ntBASIC3.18□□□□□ -1.9
SIX4Q9UIU6 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.18□□□□□ -1.9
SIX4Q9UIU6 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.18□□□□□ -1.9
SIX4Q9UIU6 USP12PX-201ENST00000432383 1057 ntBASIC3.18□□□□□ -1.9
SIX4Q9UIU6 MTCO3P18-201ENST00000440206 761 ntBASIC3.18□□□□□ -1.9
SIX4Q9UIU6 AC073415.1-201ENST00000449240 153 ntBASIC3.18□□□□□ -1.9
SIX4Q9UIU6 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.18□□□□□ -1.9
SIX4Q9UIU6 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.18□□□□□ -1.9
SIX4Q9UIU6 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.18□□□□□ -1.9
SIX4Q9UIU6 RN7SL432P-201ENST00000484057 298 ntBASIC3.18□□□□□ -1.9
SIX4Q9UIU6 AC108860.1-201ENST00000484521 383 ntBASIC3.18□□□□□ -1.9
SIX4Q9UIU6 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.18□□□□□ -1.9
SIX4Q9UIU6 AC004062.1-201ENST00000509926 645 ntBASIC3.18□□□□□ -1.9
SIX4Q9UIU6 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.18□□□□□ -1.9
SIX4Q9UIU6 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.18□□□□□ -1.9
SIX4Q9UIU6 AC068657.1-201ENST00000520807 306 ntBASIC3.18□□□□□ -1.9
SIX4Q9UIU6 OR5B19P-201ENST00000531766 928 ntBASIC3.18□□□□□ -1.9
SIX4Q9UIU6 SNRPGP16-201ENST00000533275 226 ntBASIC3.18□□□□□ -1.9
SIX4Q9UIU6 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.18□□□□□ -1.9
SIX4Q9UIU6 AC022080.3-201ENST00000544433 482 ntBASIC3.18□□□□□ -1.9
SIX4Q9UIU6 AC093012.1-202ENST00000549403 582 ntBASIC3.18□□□□□ -1.9
SIX4Q9UIU6 AL121579.1-201ENST00000555129 305 ntBASIC3.18□□□□□ -1.9
SIX4Q9UIU6 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.18□□□□□ -1.9
SIX4Q9UIU6 MIR4775-201ENST00000581168 75 ntBASIC3.18□□□□□ -1.9
SIX4Q9UIU6 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.18□□□□□ -1.9
SIX4Q9UIU6 DPPA3P3-201ENST00000603842 430 ntBASIC3.18□□□□□ -1.9
SIX4Q9UIU6 FRG1KP-201ENST00000623592 341 ntBASIC3.18□□□□□ -1.9
SIX4Q9UIU6 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.18□□□□□ -1.9
SIX4Q9UIU6 ZNF807-201ENST00000328088 1707 ntBASIC3.18□□□□□ -1.9
SIX4Q9UIU6 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.17□□□□□ -1.9
SIX4Q9UIU6 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.17□□□□□ -1.9
SIX4Q9UIU6 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SIX4Q9UIU6 Y_RNA.255-201ENST00000364581 97 ntBASIC3.17□□□□□ -1.9
SIX4Q9UIU6 UBA52P6-201ENST00000399822 382 ntBASIC3.17□□□□□ -1.9
SIX4Q9UIU6 RNA5SP274-201ENST00000410484 108 ntBASIC3.17□□□□□ -1.9
SIX4Q9UIU6 AC096664.2-201ENST00000411843 406 ntBASIC3.17□□□□□ -1.9
SIX4Q9UIU6 SNRPEP10-201ENST00000420249 274 ntBASIC3.17□□□□□ -1.9
SIX4Q9UIU6 TXNP1-201ENST00000441872 371 ntBASIC3.17□□□□□ -1.9
SIX4Q9UIU6 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.17□□□□□ -1.9
SIX4Q9UIU6 UQCRHP3-201ENST00000451503 251 ntBASIC3.17□□□□□ -1.9
SIX4Q9UIU6 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.17□□□□□ -1.9
SIX4Q9UIU6 AL162395.1-201ENST00000457882 422 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms