Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 AL358472.1-201ENST00000431295 329 ntBASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 AL049745.1-201ENST00000433953 286 ntBASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 AC073901.1-201ENST00000462471 408 ntBASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 HSPE1P6-201ENST00000479457 291 ntBASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 SUMO2P6-201ENST00000505273 288 ntBASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 APOOP4-201ENST00000513530 597 ntBASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 RNU6-1333P-201ENST00000516162 93 ntBASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 SNORA31.8-201ENST00000516327 108 ntBASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 RNU7-110P-201ENST00000516891 62 ntBASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 SNORA31.22-201ENST00000517204 135 ntBASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 TGIF1P1-201ENST00000558095 802 ntBASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 MED28P6-201ENST00000558776 231 ntBASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 AC233702.2-202ENST00000562547 291 ntBASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 AC011487.3-201ENST00000593607 453 ntBASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 AL133393.1-201ENST00000603277 287 ntBASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 SRGNP1-201ENST00000603392 451 ntBASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 Xist_exon1.1-201ENST00000618930 85 ntBASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 Y_RNA.778-201ENST00000620203 90 ntBASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 AL450345.1-202ENST00000605741 3881 ntBASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 MAPK10-349ENST00000641767 3661 ntBASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 AL138820.1-201ENST00000617901 5305 ntBASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 RNU4-84P-201ENST00000364200 139 ntBASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 RNA5SP90-201ENST00000364801 99 ntBASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 Y_RNA.357-201ENST00000365487 109 ntBASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 SNORD116-14-201ENST00000383894 92 ntBASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 SNORD116-17-201ENST00000383929 92 ntBASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 SNORD116-15-201ENST00000384445 92 ntBASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 SNORD116-20-201ENST00000384529 92 ntBASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 SNORD116-19-201ENST00000384729 92 ntBASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 Y_RNA.571-201ENST00000384753 98 ntBASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 SNORA40.19-201ENST00000390846 128 ntBASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 LAP3P1-201ENST00000403648 294 ntBASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 Z82188.1-201ENST00000436709 154 ntBASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 AC016700.2-201ENST00000446011 156 ntBASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 RN7SL346P-201ENST00000491561 294 ntBASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 RNU6-143P-201ENST00000516942 93 ntBASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 ATP5F1P5-201ENST00000526403 760 ntBASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 AC103996.1-201ENST00000555468 102 ntBASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 AC112693.2-201ENST00000556538 232 ntBASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 AL157871.3-201ENST00000557231 293 ntBASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 MIR3934-201ENST00000579806 107 ntBASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 AL008718.3-201ENST00000610217 321 ntBASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 AL731532.2-201ENST00000623542 1953 ntBASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 OR4G2P-202ENST00000641004 1759 ntBASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 USP8P1-201ENST00000494673 3183 ntBASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 AC010332.2-201ENST00000613083 1904 ntBASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CUEDC1Q9NWM3 LINC01355-201ENST00000566551 5444 ntBASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 RNU1-106P-201ENST00000384382 164 ntBASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 CTSL3P-202ENST00000412179 788 ntBASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 AL451062.2-201ENST00000427515 271 ntBASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 snoU13.30-201ENST00000458951 104 ntBASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 AC009127.1-201ENST00000467090 155 ntBASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 RPL23AP45-201ENST00000476406 468 ntBASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 AL049874.1-201ENST00000489560 388 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms