Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 SAR1AP4-201ENST00000429225 591 ntBASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 HMGB1P9-201ENST00000429856 646 ntBASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 CECR9-201ENST00000453421 199 ntBASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 SNORD42A-201ENST00000459584 64 ntBASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 MRPS17P3-201ENST00000465453 385 ntBASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 RAP1BP2-201ENST00000478270 544 ntBASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 AC096576.1-201ENST00000489014 359 ntBASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 RNU2-46P-201ENST00000517038 113 ntBASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 AC022634.1-201ENST00000520765 532 ntBASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 GTF3AP2-201ENST00000557014 266 ntBASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 MIR4513-201ENST00000581077 86 ntBASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 MIR3682-201ENST00000581338 84 ntBASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 DUXAP4-201ENST00000603046 613 ntBASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 AP002360.4-201ENST00000606980 481 ntBASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 DUSP12P1-201ENST00000612874 516 ntBASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 MTND5P42-201ENST00000637720 498 ntBASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.42□□□□□ -1.86
SMC4Q9NTJ3 RNU6-884P-201ENST00000363889 107 ntBASIC3.42□□□□□ -1.86
SMC4Q9NTJ3 SNORA75-201ENST00000384158 137 ntBASIC3.42□□□□□ -1.86
SMC4Q9NTJ3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SMC4Q9NTJ3 RNU2-68P-201ENST00000410878 191 ntBASIC3.42□□□□□ -1.86
SMC4Q9NTJ3 RNU6-195P-201ENST00000411352 109 ntBASIC3.42□□□□□ -1.86
SMC4Q9NTJ3 RPL26P27-201ENST00000414397 437 ntBASIC3.42□□□□□ -1.86
SMC4Q9NTJ3 ATG3P1-201ENST00000419507 911 ntBASIC3.42□□□□□ -1.86
SMC4Q9NTJ3 AC007283.2-201ENST00000424739 197 ntBASIC3.42□□□□□ -1.86
SMC4Q9NTJ3 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.42□□□□□ -1.86
SMC4Q9NTJ3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.42□□□□□ -1.86
SMC4Q9NTJ3 AL033528.1-201ENST00000453780 140 ntBASIC3.42□□□□□ -1.86
SMC4Q9NTJ3 RPL26P9-201ENST00000457466 433 ntBASIC3.42□□□□□ -1.86
SMC4Q9NTJ3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.42□□□□□ -1.86
SMC4Q9NTJ3 RPL36AP51-201ENST00000487216 318 ntBASIC3.42□□□□□ -1.86
SMC4Q9NTJ3 RPL39P36-201ENST00000490784 156 ntBASIC3.42□□□□□ -1.86
SMC4Q9NTJ3 RPS27P26-201ENST00000494583 239 ntBASIC3.42□□□□□ -1.86
SMC4Q9NTJ3 RAC1P5-201ENST00000512182 576 ntBASIC3.42□□□□□ -1.86
SMC4Q9NTJ3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.42□□□□□ -1.86
SMC4Q9NTJ3 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.42□□□□□ -1.86
SMC4Q9NTJ3 AC005771.1-201ENST00000585581 349 ntBASIC3.42□□□□□ -1.86
SMC4Q9NTJ3 AC098614.4-201ENST00000607601 462 ntBASIC3.42□□□□□ -1.86
SMC4Q9NTJ3 AC008498.1-201ENST00000613012 531 ntBASIC3.42□□□□□ -1.86
SMC4Q9NTJ3 AP001506.1-201ENST00000615444 211 ntBASIC3.42□□□□□ -1.86
SMC4Q9NTJ3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.42□□□□□ -1.86
SMC4Q9NTJ3 AC090582.1-201ENST00000636321 199 ntBASIC3.42□□□□□ -1.86
SMC4Q9NTJ3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SMC4Q9NTJ3 TEX21P-201ENST00000447107 1476 ntBASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 CR848007.1-201ENST00000442354 1699 ntBASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 AC073343.1-201ENST00000328239 651 ntBASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 SNORD56.2-201ENST00000363242 71 ntBASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 RNU6-778P-201ENST00000363269 103 ntBASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 U8.3-201ENST00000363321 132 ntBASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 RNU6-348P-201ENST00000384386 107 ntBASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 MIR9-1-201ENST00000385198 89 ntBASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 BTF3L4P1-201ENST00000413813 468 ntBASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 VN1R108P-201ENST00000431580 830 ntBASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 MTND1P29-201ENST00000448112 647 ntBASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 AC105313.1-201ENST00000509121 353 ntBASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 RNA5SP165-201ENST00000517142 115 ntBASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 MTCO3P13-201ENST00000577757 781 ntBASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 HMGN2P15-201ENST00000585707 270 ntBASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 RPL23AP78-201ENST00000599928 470 ntBASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 SEPT7P9-203ENST00000604116 343 ntBASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 AL137843.1-201ENST00000605078 385 ntBASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 AC009509.4-201ENST00000619202 509 ntBASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.41□□□□□ -1.86
SMC4Q9NTJ3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.4□□□□□ -1.86
SMC4Q9NTJ3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
SMC4Q9NTJ3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SMC4Q9NTJ3 RNU6-512P-201ENST00000364438 103 ntBASIC3.4□□□□□ -1.87
SMC4Q9NTJ3 Y_RNA.359-201ENST00000365498 102 ntBASIC3.4□□□□□ -1.87
SMC4Q9NTJ3 Y_RNA.500-201ENST00000384466 111 ntBASIC3.4□□□□□ -1.87
SMC4Q9NTJ3 MIR767-201ENST00000390228 109 ntBASIC3.4□□□□□ -1.87
SMC4Q9NTJ3 RNA5SP354-201ENST00000391247 136 ntBASIC3.4□□□□□ -1.87
SMC4Q9NTJ3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.4□□□□□ -1.87
SMC4Q9NTJ3 RNU6-248P-201ENST00000410720 107 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms