Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 BNIP3P8-201ENST00000597863 560 ntBASIC2.05□□□□□ -2.08
CCL28Q9NRJ3 AC022893.3-201ENST00000607665 437 ntBASIC2.05□□□□□ -2.08
CCL28Q9NRJ3 AC091304.9-201ENST00000612091 226 ntBASIC2.05□□□□□ -2.08
CCL28Q9NRJ3 AC025048.6-202ENST00000627667 438 ntBASIC2.05□□□□□ -2.08
CCL28Q9NRJ3 AL512643.1-201ENST00000635735 524 ntBASIC2.05□□□□□ -2.08
CCL28Q9NRJ3 AC010889.1-201ENST00000566193 2666 ntBASIC2.05□□□□□ -2.08
CCL28Q9NRJ3 MTND4P35-201ENST00000604257 1375 ntBASIC2.05□□□□□ -2.08
CCL28Q9NRJ3 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CCL28Q9NRJ3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.05□□□□□ -2.08
CCL28Q9NRJ3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 GNG5P1-201ENST00000255500 204 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AC073343.1-201ENST00000328239 651 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 RNA5SP456-201ENST00000364002 114 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 RNU6-1180P-201ENST00000364935 107 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 RNU1-51P-201ENST00000365345 176 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 SET-203ENST00000372688 801 ntTSL 2 BASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 MIR301A-201ENST00000385261 86 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 SNORA26.8-201ENST00000391306 124 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 RNU2-8P-201ENST00000410727 190 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AC092809.3-201ENST00000415453 231 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 NPM1P11-201ENST00000417106 855 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AL591704.1-201ENST00000432574 275 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 MTND6P13-201ENST00000443510 523 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 OSTCP8-201ENST00000445117 448 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 HMGN2P10-201ENST00000448085 265 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AC093899.1-201ENST00000457984 376 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 ZNF271P-202ENST00000465539 1970 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 TRBV1-201ENST00000476502 284 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 RPL23AP70-201ENST00000483361 460 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 SCARNA17.1-201ENST00000516211 143 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 SCARNA17.2-201ENST00000516334 143 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 RNA5SP402-201ENST00000517148 110 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 SCARNA11.3-201ENST00000517276 130 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AC103810.1-201ENST00000579873 453 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AC138761.3-201ENST00000579993 334 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AC090616.3-201ENST00000582184 217 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AC073544.2-201ENST00000601155 540 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AL645944.1-201ENST00000603857 493 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AC007938.3-201ENST00000604965 623 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AC104237.2-201ENST00000612456 443 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AL589743.7-201ENST00000612637 233 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AL442067.2-201ENST00000614033 363 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AC130324.3-201ENST00000614165 542 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 SCARNA17.4-201ENST00000614296 143 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AC108479.2-201ENST00000617314 601 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AC091931.1-201ENST00000623488 728 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 AL137790.1-201ENST00000634283 177 ntBASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCL28Q9NRJ3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 ADAM3A-203ENST00000461344 2157 ntBASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 MIR21-201ENST00000362134 72 ntBASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 RNU6-461P-201ENST00000364195 107 ntBASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 RNU6-39P-201ENST00000384344 107 ntBASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 RN7SKP27-201ENST00000410684 333 ntBASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 RNA5SP492-201ENST00000411330 114 ntBASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 HMGN1P14-201ENST00000412459 517 ntBASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 AC092427.1-202ENST00000430569 476 ntBASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 RPS24P1-201ENST00000438550 371 ntBASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 BRK1P2-201ENST00000442875 223 ntBASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 DPPA3P1-201ENST00000448050 469 ntBASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 MTND3P7-201ENST00000474435 343 ntBASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 RAP1BP2-201ENST00000478270 544 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms