Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 RNU6-908P-201ENST00000410160 94 ntBASIC3.12□□□□□ -1.91
KLHL1Q9NR64 Z92545.1-201ENST00000411782 234 ntBASIC3.12□□□□□ -1.91
KLHL1Q9NR64 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.12□□□□□ -1.91
KLHL1Q9NR64 AL590383.1-201ENST00000428602 75 ntBASIC3.12□□□□□ -1.91
KLHL1Q9NR64 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.12□□□□□ -1.91
KLHL1Q9NR64 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.12□□□□□ -1.91
KLHL1Q9NR64 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.12□□□□□ -1.91
KLHL1Q9NR64 HMGN1P18-201ENST00000457642 277 ntBASIC3.12□□□□□ -1.91
KLHL1Q9NR64 RPS29P15-201ENST00000458329 171 ntBASIC3.12□□□□□ -1.91
KLHL1Q9NR64 RNU7-182P-201ENST00000459009 62 ntBASIC3.12□□□□□ -1.91
KLHL1Q9NR64 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.12□□□□□ -1.91
KLHL1Q9NR64 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.12□□□□□ -1.91
KLHL1Q9NR64 AC006445.2-201ENST00000510061 472 ntBASIC3.12□□□□□ -1.91
KLHL1Q9NR64 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.12□□□□□ -1.91
KLHL1Q9NR64 AC025465.4-201ENST00000513422 638 ntBASIC3.12□□□□□ -1.91
KLHL1Q9NR64 RNA5SP385-201ENST00000515947 110 ntBASIC3.12□□□□□ -1.91
KLHL1Q9NR64 AC107934.2-201ENST00000518653 310 ntBASIC3.12□□□□□ -1.91
KLHL1Q9NR64 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.12□□□□□ -1.91
KLHL1Q9NR64 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.12□□□□□ -1.91
KLHL1Q9NR64 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.12□□□□□ -1.91
KLHL1Q9NR64 HIF1AP1-201ENST00000553642 175 ntBASIC3.12□□□□□ -1.91
KLHL1Q9NR64 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.12□□□□□ -1.91
KLHL1Q9NR64 AL121579.1-201ENST00000555129 305 ntBASIC3.12□□□□□ -1.91
KLHL1Q9NR64 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.12□□□□□ -1.91
KLHL1Q9NR64 RPL23AP84-201ENST00000571193 464 ntBASIC3.12□□□□□ -1.91
KLHL1Q9NR64 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
KLHL1Q9NR64 SDR42E1P2-201ENST00000614861 481 ntBASIC3.12□□□□□ -1.91
KLHL1Q9NR64 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.12□□□□□ -1.91
KLHL1Q9NR64 AC093648.1-201ENST00000623546 606 ntBASIC3.12□□□□□ -1.91
KLHL1Q9NR64 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.12□□□□□ -1.91
KLHL1Q9NR64 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.12□□□□□ -1.91
KLHL1Q9NR64 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.12□□□□□ -1.91
KLHL1Q9NR64 MAPK10-322ENST00000641485 4530 ntBASIC3.12□□□□□ -1.91
KLHL1Q9NR64 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
KLHL1Q9NR64 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
KLHL1Q9NR64 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
KLHL1Q9NR64 FAM35CP-201ENST00000554755 2470 ntBASIC3.11□□□□□ -1.91
KLHL1Q9NR64 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.11□□□□□ -1.91
KLHL1Q9NR64 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
KLHL1Q9NR64 NACAP2-201ENST00000318548 624 ntBASIC3.11□□□□□ -1.91
KLHL1Q9NR64 RNU5E-4P-201ENST00000364931 120 ntBASIC3.11□□□□□ -1.91
KLHL1Q9NR64 Y_RNA.303-201ENST00000364998 94 ntBASIC3.11□□□□□ -1.91
KLHL1Q9NR64 RNU6-996P-201ENST00000365438 107 ntBASIC3.11□□□□□ -1.91
KLHL1Q9NR64 RNU6-701P-201ENST00000384059 107 ntBASIC3.11□□□□□ -1.91
KLHL1Q9NR64 NDUFS5P1-201ENST00000405668 289 ntBASIC3.11□□□□□ -1.91
KLHL1Q9NR64 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.11□□□□□ -1.91
KLHL1Q9NR64 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.11□□□□□ -1.91
KLHL1Q9NR64 SNRPEP10-201ENST00000420249 274 ntBASIC3.11□□□□□ -1.91
KLHL1Q9NR64 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.11□□□□□ -1.91
KLHL1Q9NR64 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.11□□□□□ -1.91
KLHL1Q9NR64 RPL23AP22-201ENST00000437556 453 ntBASIC3.11□□□□□ -1.91
KLHL1Q9NR64 AC009969.1-201ENST00000438726 172 ntBASIC3.11□□□□□ -1.91
KLHL1Q9NR64 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.11□□□□□ -1.91
KLHL1Q9NR64 MTND3P10-201ENST00000450967 341 ntBASIC3.11□□□□□ -1.91
KLHL1Q9NR64 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.11□□□□□ -1.91
KLHL1Q9NR64 RPS20P20-201ENST00000460498 340 ntBASIC3.11□□□□□ -1.91
KLHL1Q9NR64 RPL23AP67-201ENST00000465341 474 ntBASIC3.11□□□□□ -1.91
KLHL1Q9NR64 MRPS17P3-201ENST00000465453 385 ntBASIC3.11□□□□□ -1.91
KLHL1Q9NR64 RPS26P21-201ENST00000475397 348 ntBASIC3.11□□□□□ -1.91
KLHL1Q9NR64 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.11□□□□□ -1.91
KLHL1Q9NR64 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.11□□□□□ -1.91
KLHL1Q9NR64 APOOP4-201ENST00000513530 597 ntBASIC3.11□□□□□ -1.91
KLHL1Q9NR64 RNU6-358P-201ENST00000516564 75 ntBASIC3.11□□□□□ -1.91
KLHL1Q9NR64 SNORD59.2-201ENST00000516873 68 ntBASIC3.11□□□□□ -1.91
KLHL1Q9NR64 RNU6-835P-201ENST00000516974 104 ntBASIC3.11□□□□□ -1.91
KLHL1Q9NR64 NRON-201ENST00000517270 370 ntBASIC3.11□□□□□ -1.91
KLHL1Q9NR64 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.11□□□□□ -1.91
KLHL1Q9NR64 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.11□□□□□ -1.91
KLHL1Q9NR64 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.11□□□□□ -1.91
KLHL1Q9NR64 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.11□□□□□ -1.91
KLHL1Q9NR64 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.11□□□□□ -1.91
KLHL1Q9NR64 AC010133.1-201ENST00000615809 842 ntBASIC3.11□□□□□ -1.91
KLHL1Q9NR64 MIR7112-201ENST00000616126 65 ntBASIC3.11□□□□□ -1.91
KLHL1Q9NR64 AL138880.2-201ENST00000616214 239 ntBASIC3.11□□□□□ -1.91
KLHL1Q9NR64 AC024940.5-201ENST00000622889 474 ntBASIC3.11□□□□□ -1.91
KLHL1Q9NR64 AC006020.1-201ENST00000420179 1854 ntBASIC3.11□□□□□ -1.91
KLHL1Q9NR64 AC110774.1-201ENST00000623567 2018 ntBASIC3.1□□□□□ -1.91
KLHL1Q9NR64 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KLHL1Q9NR64 AL365361.1-201ENST00000566942 3481 ntBASIC3.1□□□□□ -1.91
KLHL1Q9NR64 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KLHL1Q9NR64 RNU6-960P-201ENST00000364056 120 ntBASIC3.1□□□□□ -1.91
KLHL1Q9NR64 Y_RNA.255-201ENST00000364581 97 ntBASIC3.1□□□□□ -1.91
KLHL1Q9NR64 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
KLHL1Q9NR64 FGF7P8-201ENST00000402994 292 ntBASIC3.1□□□□□ -1.91
KLHL1Q9NR64 RNU6-1068P-201ENST00000410958 103 ntBASIC3.1□□□□□ -1.91
KLHL1Q9NR64 OR9R1P-201ENST00000412200 877 ntBASIC3.1□□□□□ -1.91
KLHL1Q9NR64 RPL30P16-201ENST00000419341 429 ntBASIC3.1□□□□□ -1.91
KLHL1Q9NR64 AC245291.1-201ENST00000419501 328 ntBASIC3.1□□□□□ -1.91
KLHL1Q9NR64 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.1□□□□□ -1.91
KLHL1Q9NR64 MTCYBP8-201ENST00000422855 651 ntBASIC3.1□□□□□ -1.91
KLHL1Q9NR64 AC091390.3-201ENST00000426478 338 ntBASIC3.1□□□□□ -1.91
KLHL1Q9NR64 RPL23AP82-202ENST00000427528 469 ntBASIC3.1□□□□□ -1.91
KLHL1Q9NR64 RPL36AP6-201ENST00000435770 321 ntBASIC3.1□□□□□ -1.91
KLHL1Q9NR64 CALM1P1-201ENST00000442082 433 ntBASIC3.1□□□□□ -1.91
KLHL1Q9NR64 GAPDHP27-201ENST00000447427 1020 ntBASIC3.1□□□□□ -1.91
KLHL1Q9NR64 MTND1P18-201ENST00000448191 573 ntBASIC3.1□□□□□ -1.91
KLHL1Q9NR64 CACYBPP2-201ENST00000453625 678 ntBASIC3.1□□□□□ -1.91
KLHL1Q9NR64 CENPBD1P1-201ENST00000464061 469 ntBASIC3.1□□□□□ -1.91
KLHL1Q9NR64 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.1□□□□□ -1.91
KLHL1Q9NR64 AL163973.1-201ENST00000484753 577 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms