Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
HPS4Q9NQG7 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.66□□□□□ -1.98
HPS4Q9NQG7 AC093536.2-201ENST00000565257 1406 ntBASIC2.66□□□□□ -1.98
HPS4Q9NQG7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
HPS4Q9NQG7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
HPS4Q9NQG7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
HPS4Q9NQG7 UBE2L2-201ENST00000254302 429 ntBASIC2.65□□□□□ -1.99
HPS4Q9NQG7 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.65□□□□□ -1.99
HPS4Q9NQG7 RNU6-461P-201ENST00000364195 107 ntBASIC2.65□□□□□ -1.99
HPS4Q9NQG7 RNU6-701P-201ENST00000384059 107 ntBASIC2.65□□□□□ -1.99
HPS4Q9NQG7 RNU6-533P-201ENST00000384144 107 ntBASIC2.65□□□□□ -1.99
HPS4Q9NQG7 SNORD115.1-201ENST00000391109 76 ntBASIC2.65□□□□□ -1.99
HPS4Q9NQG7 AC007064.1-201ENST00000412238 351 ntBASIC2.65□□□□□ -1.99
HPS4Q9NQG7 MTND2P18-201ENST00000419962 1030 ntBASIC2.65□□□□□ -1.99
HPS4Q9NQG7 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.65□□□□□ -1.99
HPS4Q9NQG7 AL445567.1-201ENST00000439121 144 ntBASIC2.65□□□□□ -1.99
HPS4Q9NQG7 MRPL50P4-201ENST00000446432 475 ntBASIC2.65□□□□□ -1.99
HPS4Q9NQG7 ST13P20-201ENST00000447996 1065 ntBASIC2.65□□□□□ -1.99
HPS4Q9NQG7 RPL26P9-201ENST00000457466 433 ntBASIC2.65□□□□□ -1.99
HPS4Q9NQG7 RPL30P6-201ENST00000475925 342 ntBASIC2.65□□□□□ -1.99
HPS4Q9NQG7 MRPL42P6-201ENST00000486397 371 ntBASIC2.65□□□□□ -1.99
HPS4Q9NQG7 RPL36AP51-201ENST00000487216 318 ntBASIC2.65□□□□□ -1.99
HPS4Q9NQG7 RPS15AP34-201ENST00000487776 387 ntBASIC2.65□□□□□ -1.99
HPS4Q9NQG7 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.65□□□□□ -1.99
HPS4Q9NQG7 AC112204.1-201ENST00000502591 103 ntBASIC2.65□□□□□ -1.99
HPS4Q9NQG7 AC005178.1-201ENST00000508392 440 ntBASIC2.65□□□□□ -1.99
HPS4Q9NQG7 AP006587.4-201ENST00000526053 529 ntBASIC2.65□□□□□ -1.99
HPS4Q9NQG7 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.65□□□□□ -1.99
HPS4Q9NQG7 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.65□□□□□ -1.99
HPS4Q9NQG7 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.65□□□□□ -1.99
HPS4Q9NQG7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.65□□□□□ -1.99
HPS4Q9NQG7 MIR3118-1-201ENST00000581787 76 ntBASIC2.65□□□□□ -1.99
HPS4Q9NQG7 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.65□□□□□ -1.99
HPS4Q9NQG7 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.65□□□□□ -1.99
HPS4Q9NQG7 OR1M4P-201ENST00000589199 287 ntBASIC2.65□□□□□ -1.99
HPS4Q9NQG7 AC007621.1-201ENST00000604544 437 ntBASIC2.65□□□□□ -1.99
HPS4Q9NQG7 AL161798.1-201ENST00000604630 131 ntBASIC2.65□□□□□ -1.99
HPS4Q9NQG7 AC121334.2-201ENST00000605387 271 ntBASIC2.65□□□□□ -1.99
HPS4Q9NQG7 AC008498.1-201ENST00000613012 531 ntBASIC2.65□□□□□ -1.99
HPS4Q9NQG7 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.65□□□□□ -1.99
HPS4Q9NQG7 AC025034.2-201ENST00000623264 286 ntBASIC2.65□□□□□ -1.99
HPS4Q9NQG7 AC079248.2-201ENST00000623779 326 ntBASIC2.65□□□□□ -1.99
HPS4Q9NQG7 AC068057.2-201ENST00000624047 895 ntBASIC2.65□□□□□ -1.99
HPS4Q9NQG7 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.65□□□□□ -1.99
HPS4Q9NQG7 MTND5P29-201ENST00000458676 1807 ntBASIC2.65□□□□□ -1.99
HPS4Q9NQG7 AC080100.1-201ENST00000624239 5356 ntBASIC2.65□□□□□ -1.99
HPS4Q9NQG7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HPS4Q9NQG7 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HPS4Q9NQG7 RNY4P16-201ENST00000364768 94 ntBASIC2.64□□□□□ -1.99
HPS4Q9NQG7 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.64□□□□□ -1.99
HPS4Q9NQG7 RNU6-14P-201ENST00000384630 106 ntBASIC2.64□□□□□ -1.99
HPS4Q9NQG7 Y_RNA.560-201ENST00000384689 102 ntBASIC2.64□□□□□ -1.99
HPS4Q9NQG7 MIR27B-201ENST00000385129 97 ntBASIC2.64□□□□□ -1.99
HPS4Q9NQG7 AL049545.1-201ENST00000401856 572 ntBASIC2.64□□□□□ -1.99
HPS4Q9NQG7 SNORA3.2-201ENST00000408221 125 ntBASIC2.64□□□□□ -1.99
HPS4Q9NQG7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.64□□□□□ -1.99
HPS4Q9NQG7 NPM1P11-201ENST00000417106 855 ntBASIC2.64□□□□□ -1.99
HPS4Q9NQG7 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.64□□□□□ -1.99
HPS4Q9NQG7 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.64□□□□□ -1.99
HPS4Q9NQG7 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.64□□□□□ -1.99
HPS4Q9NQG7 AL445687.1-201ENST00000439946 251 ntBASIC2.64□□□□□ -1.99
HPS4Q9NQG7 AC011816.1-201ENST00000441346 546 ntBASIC2.64□□□□□ -1.99
HPS4Q9NQG7 EPS15P1-201ENST00000448836 336 ntBASIC2.64□□□□□ -1.99
HPS4Q9NQG7 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.64□□□□□ -1.99
HPS4Q9NQG7 AL590365.1-201ENST00000450788 243 ntBASIC2.64□□□□□ -1.99
HPS4Q9NQG7 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.64□□□□□ -1.99
HPS4Q9NQG7 RPL37P25-201ENST00000507308 276 ntBASIC2.64□□□□□ -1.99
HPS4Q9NQG7 TBCAP3-201ENST00000512475 312 ntBASIC2.64□□□□□ -1.99
HPS4Q9NQG7 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.64□□□□□ -1.99
HPS4Q9NQG7 RNU6-232P-201ENST00000517144 64 ntBASIC2.64□□□□□ -1.99
HPS4Q9NQG7 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.64□□□□□ -1.99
HPS4Q9NQG7 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.64□□□□□ -1.99
HPS4Q9NQG7 AC007834.2-201ENST00000536310 343 ntBASIC2.64□□□□□ -1.99
HPS4Q9NQG7 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.64□□□□□ -1.99
HPS4Q9NQG7 OSBPL9P5-201ENST00000542581 171 ntBASIC2.64□□□□□ -1.99
HPS4Q9NQG7 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.64□□□□□ -1.99
HPS4Q9NQG7 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.64□□□□□ -1.99
HPS4Q9NQG7 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.64□□□□□ -1.99
HPS4Q9NQG7 AC135628.1-201ENST00000568867 534 ntBASIC2.64□□□□□ -1.99
HPS4Q9NQG7 MIR5697-201ENST00000578045 78 ntBASIC2.64□□□□□ -1.99
HPS4Q9NQG7 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.64□□□□□ -1.99
HPS4Q9NQG7 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.64□□□□□ -1.99
HPS4Q9NQG7 AL356575.1-201ENST00000603008 283 ntBASIC2.64□□□□□ -1.99
HPS4Q9NQG7 AL049779.4-201ENST00000604500 156 ntBASIC2.64□□□□□ -1.99
HPS4Q9NQG7 AP000860.1-201ENST00000605250 559 ntBASIC2.64□□□□□ -1.99
HPS4Q9NQG7 BX664608.1-201ENST00000610519 487 ntBASIC2.64□□□□□ -1.99
HPS4Q9NQG7 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.64□□□□□ -1.99
HPS4Q9NQG7 AC027807.2-201ENST00000616099 408 ntBASIC2.64□□□□□ -1.99
HPS4Q9NQG7 AC092104.1-201ENST00000497346 1441 ntBASIC2.64□□□□□ -1.99
HPS4Q9NQG7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
HPS4Q9NQG7 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HPS4Q9NQG7 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.64□□□□□ -1.99
HPS4Q9NQG7 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.64□□□□□ -1.99
HPS4Q9NQG7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
HPS4Q9NQG7 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.63□□□□□ -1.99
HPS4Q9NQG7 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.63□□□□□ -1.99
HPS4Q9NQG7 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.63□□□□□ -1.99
HPS4Q9NQG7 RNU6-512P-201ENST00000364438 103 ntBASIC2.63□□□□□ -1.99
HPS4Q9NQG7 SNORA67.1-201ENST00000364749 141 ntBASIC2.63□□□□□ -1.99
HPS4Q9NQG7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms