Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 AC078899.2-201ENST00000595282 212 ntBASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 AC034229.4-201ENST00000607861 441 ntBASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 AC009974.1-201ENST00000608881 455 ntBASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 AC092574.1-201ENST00000609771 420 ntBASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 AC245297.2-201ENST00000610119 565 ntBASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 MIR6134-201ENST00000617606 109 ntBASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 AC013470.4-201ENST00000619978 986 ntBASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 AC099654.9-201ENST00000637055 678 ntBASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC1.76□□□□□ -2.13
VCX3AQ9NNX9 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 SNORA16.1-201ENST00000364597 132 ntBASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 RNA5SP363-201ENST00000365072 115 ntBASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 RNA5SP240-201ENST00000365355 128 ntBASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 RNU6-14P-201ENST00000384630 106 ntBASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 AL591034.2-201ENST00000402839 359 ntBASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 AL359704.1-201ENST00000411586 781 ntBASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 AL451062.2-201ENST00000427515 271 ntBASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 RPS25P9-201ENST00000435591 252 ntBASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 AL353706.1-201ENST00000436728 494 ntBASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 AC018868.1-201ENST00000491307 315 ntBASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 AC079395.1-201ENST00000510981 262 ntBASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 SAP18P1-201ENST00000512058 390 ntBASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 RN7SKP132-201ENST00000516001 208 ntBASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 AL020997.2-201ENST00000602607 184 ntBASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 AL713866.2-201ENST00000603579 219 ntBASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 AC007938.3-201ENST00000604965 623 ntBASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 AL121895.2-201ENST00000619558 447 ntBASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 AP003476.1-201ENST00000623984 516 ntBASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 AC138627.2-201ENST00000624202 601 ntBASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 AL137790.1-201ENST00000634283 177 ntBASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.75□□□□□ -2.13
VCX3AQ9NNX9 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 RNU4-42P-201ENST00000364738 142 ntBASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 SNORA25B-201ENST00000365507 128 ntBASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 MIR95-201ENST00000385072 81 ntBASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 AC119751.3-201ENST00000399720 670 ntBASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 MIR320C1-201ENST00000408566 88 ntBASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 AL353621.1-201ENST00000418219 243 ntBASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 RPL7P34-201ENST00000433316 712 ntBASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 FABP5P13-201ENST00000452144 328 ntBASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 USP9YP10-201ENST00000454868 628 ntBASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 CYP2C59P-201ENST00000457790 269 ntBASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 S100A11P2-201ENST00000467589 312 ntBASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 AC104685.1-201ENST00000502445 371 ntBASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 HMGB1P35-201ENST00000503360 598 ntBASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 DUXAP1-201ENST00000556632 463 ntBASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 BNIP3P27-201ENST00000599991 412 ntBASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 AL606834.3-201ENST00000602615 496 ntBASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 CTSLP2-204ENST00000629029 392 ntBASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.74□□□□□ -2.13
VCX3AQ9NNX9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
VCX3AQ9NNX9 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
VCX3AQ9NNX9 U8.3-201ENST00000363321 132 ntBASIC1.73□□□□□ -2.13
VCX3AQ9NNX9 RNU6-1280P-201ENST00000365211 107 ntBASIC1.73□□□□□ -2.13
VCX3AQ9NNX9 SNORD116-12-201ENST00000384468 92 ntBASIC1.73□□□□□ -2.13
VCX3AQ9NNX9 AC078974.1-201ENST00000411597 223 ntBASIC1.73□□□□□ -2.13
VCX3AQ9NNX9 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.73□□□□□ -2.13
VCX3AQ9NNX9 AC019070.1-201ENST00000415008 1024 ntBASIC1.73□□□□□ -2.13
VCX3AQ9NNX9 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.73□□□□□ -2.13
VCX3AQ9NNX9 AL592045.1-201ENST00000429867 352 ntBASIC1.73□□□□□ -2.13
VCX3AQ9NNX9 HMGB1P27-201ENST00000431429 603 ntBASIC1.73□□□□□ -2.13
VCX3AQ9NNX9 AL117351.1-201ENST00000438864 766 ntBASIC1.73□□□□□ -2.13
VCX3AQ9NNX9 AL441985.1-201ENST00000457727 251 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms