Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
POLR1BQ9H9Y6 AC008264.1-201ENST00000447612 367 ntBASIC3.16□□□□□ -1.9
POLR1BQ9H9Y6 FABP5P13-201ENST00000452144 328 ntBASIC3.16□□□□□ -1.9
POLR1BQ9H9Y6 RNU7-182P-201ENST00000459009 62 ntBASIC3.16□□□□□ -1.9
POLR1BQ9H9Y6 MRPS17P3-201ENST00000465453 385 ntBASIC3.16□□□□□ -1.9
POLR1BQ9H9Y6 AC104472.2-201ENST00000469035 601 ntBASIC3.16□□□□□ -1.9
POLR1BQ9H9Y6 AC082651.2-201ENST00000496833 166 ntBASIC3.16□□□□□ -1.9
POLR1BQ9H9Y6 AC109927.2-201ENST00000506416 303 ntBASIC3.16□□□□□ -1.9
POLR1BQ9H9Y6 RPL37P25-201ENST00000507308 276 ntBASIC3.16□□□□□ -1.9
POLR1BQ9H9Y6 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.16□□□□□ -1.9
POLR1BQ9H9Y6 RNU1-143P-201ENST00000516296 146 ntBASIC3.16□□□□□ -1.9
POLR1BQ9H9Y6 RNU6-914P-201ENST00000516749 109 ntBASIC3.16□□□□□ -1.9
POLR1BQ9H9Y6 RNA5SP165-201ENST00000517142 115 ntBASIC3.16□□□□□ -1.9
POLR1BQ9H9Y6 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.16□□□□□ -1.9
POLR1BQ9H9Y6 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.16□□□□□ -1.9
POLR1BQ9H9Y6 AP003034.1-201ENST00000534621 422 ntBASIC3.16□□□□□ -1.9
POLR1BQ9H9Y6 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.16□□□□□ -1.9
POLR1BQ9H9Y6 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.16□□□□□ -1.9
POLR1BQ9H9Y6 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.16□□□□□ -1.9
POLR1BQ9H9Y6 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.16□□□□□ -1.9
POLR1BQ9H9Y6 AL355598.1-201ENST00000604169 202 ntBASIC3.16□□□□□ -1.9
POLR1BQ9H9Y6 Z84480.1-201ENST00000605131 311 ntBASIC3.16□□□□□ -1.9
POLR1BQ9H9Y6 U1.23-201ENST00000610293 146 ntBASIC3.16□□□□□ -1.9
POLR1BQ9H9Y6 RNU1-68P-201ENST00000615382 146 ntBASIC3.16□□□□□ -1.9
POLR1BQ9H9Y6 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.16□□□□□ -1.9
POLR1BQ9H9Y6 U1.39-201ENST00000621562 146 ntBASIC3.16□□□□□ -1.9
POLR1BQ9H9Y6 SEPT14P19-203ENST00000633205 211 ntBASIC3.16□□□□□ -1.9
POLR1BQ9H9Y6 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
POLR1BQ9H9Y6 AC093010.3-201ENST00000570269 15214 ntBASIC3.16□□□□□ -1.9
POLR1BQ9H9Y6 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
POLR1BQ9H9Y6 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
POLR1BQ9H9Y6 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
POLR1BQ9H9Y6 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 RN7SKP226-201ENST00000364912 300 ntBASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 SNORA44-201ENST00000384584 132 ntBASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 MIR1-2-201ENST00000384961 85 ntBASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 UBE2V1P2-201ENST00000397758 440 ntBASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 OR51A5P-201ENST00000415429 942 ntBASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 TIMM9P3-201ENST00000428659 274 ntBASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 HMGB1P9-201ENST00000429856 646 ntBASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 AL592045.1-201ENST00000429867 352 ntBASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 RPL36AP53-201ENST00000432891 316 ntBASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 MTND3P21-201ENST00000433774 331 ntBASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 RPL12P25-201ENST00000455592 494 ntBASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 AL356010.1-201ENST00000456364 102 ntBASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 RN7SL863P-201ENST00000462370 296 ntBASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 SCARNA20.6-201ENST00000517251 106 ntBASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 MTCYBP20-201ENST00000524239 1129 ntBASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 EIF1P4-201ENST00000572664 335 ntBASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 AC007684.1-201ENST00000609671 477 ntBASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 AC130324.3-201ENST00000614165 542 ntBASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 AL161629.2-201ENST00000615347 275 ntBASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 AL356321.1-201ENST00000621360 228 ntBASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 OR5AK4P-201ENST00000635912 903 ntBASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 U6.114-201ENST00000636407 96 ntBASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 AC008264.2-201ENST00000610193 3731 ntBASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 MAPK10-362ENST00000641864 4484 ntBASIC3.15□□□□□ -1.91
POLR1BQ9H9Y6 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
POLR1BQ9H9Y6 Y_RNA.1-201ENST00000352915 104 ntBASIC3.14□□□□□ -1.91
POLR1BQ9H9Y6 RNU6-799P-201ENST00000363567 107 ntBASIC3.14□□□□□ -1.91
POLR1BQ9H9Y6 U3.6-201ENST00000363622 211 ntBASIC3.14□□□□□ -1.91
POLR1BQ9H9Y6 Y_RNA.159-201ENST00000363674 87 ntBASIC3.14□□□□□ -1.91
POLR1BQ9H9Y6 SNORA5B-201ENST00000363786 132 ntBASIC3.14□□□□□ -1.91
POLR1BQ9H9Y6 DYNLT3P1-201ENST00000378574 347 ntBASIC3.14□□□□□ -1.91
POLR1BQ9H9Y6 RNU4-55P-201ENST00000410731 137 ntBASIC3.14□□□□□ -1.91
POLR1BQ9H9Y6 NDUFS5P4-201ENST00000412983 318 ntBASIC3.14□□□□□ -1.91
POLR1BQ9H9Y6 Z99755.1-201ENST00000414048 380 ntBASIC3.14□□□□□ -1.91
POLR1BQ9H9Y6 RPL26P27-201ENST00000414397 437 ntBASIC3.14□□□□□ -1.91
POLR1BQ9H9Y6 HMGN2P30-201ENST00000423237 256 ntBASIC3.14□□□□□ -1.91
POLR1BQ9H9Y6 MTCYBP5-201ENST00000423752 1135 ntBASIC3.14□□□□□ -1.91
POLR1BQ9H9Y6 MTCO2P19-201ENST00000427513 598 ntBASIC3.14□□□□□ -1.91
POLR1BQ9H9Y6 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.14□□□□□ -1.91
POLR1BQ9H9Y6 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.14□□□□□ -1.91
POLR1BQ9H9Y6 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.14□□□□□ -1.91
POLR1BQ9H9Y6 AC025750.2-201ENST00000442609 450 ntBASIC3.14□□□□□ -1.91
POLR1BQ9H9Y6 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.14□□□□□ -1.91
POLR1BQ9H9Y6 AC093392.2-201ENST00000450682 337 ntBASIC3.14□□□□□ -1.91
POLR1BQ9H9Y6 AC003071.1-201ENST00000451219 789 ntBASIC3.14□□□□□ -1.91
POLR1BQ9H9Y6 AL031183.1-201ENST00000457667 207 ntBASIC3.14□□□□□ -1.91
POLR1BQ9H9Y6 GMFBP1-201ENST00000467831 427 ntBASIC3.14□□□□□ -1.91
POLR1BQ9H9Y6 AC006483.1-201ENST00000487308 313 ntBASIC3.14□□□□□ -1.91
POLR1BQ9H9Y6 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.14□□□□□ -1.91
POLR1BQ9H9Y6 RNU6-720P-201ENST00000516363 108 ntBASIC3.14□□□□□ -1.91
POLR1BQ9H9Y6 RNU6-685P-201ENST00000517088 95 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms