Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.38□□□□□ -1.87
USP44Q9H0E7 RNU6-143P-201ENST00000516942 93 ntBASIC3.38□□□□□ -1.87
USP44Q9H0E7 RNA5SP290-201ENST00000517133 127 ntBASIC3.38□□□□□ -1.87
USP44Q9H0E7 HMGB1P41-201ENST00000520234 440 ntBASIC3.38□□□□□ -1.87
USP44Q9H0E7 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
USP44Q9H0E7 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.38□□□□□ -1.87
USP44Q9H0E7 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.38□□□□□ -1.87
USP44Q9H0E7 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.38□□□□□ -1.87
USP44Q9H0E7 AC010546.1-201ENST00000569391 485 ntBASIC3.38□□□□□ -1.87
USP44Q9H0E7 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.38□□□□□ -1.87
USP44Q9H0E7 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.38□□□□□ -1.87
USP44Q9H0E7 MIR98-201ENST00000606724 119 ntBASIC3.38□□□□□ -1.87
USP44Q9H0E7 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
USP44Q9H0E7 AC073534.2-201ENST00000620377 381 ntBASIC3.38□□□□□ -1.87
USP44Q9H0E7 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
USP44Q9H0E7 ASNSP3-201ENST00000451989 1306 ntBASIC3.38□□□□□ -1.87
USP44Q9H0E7 AC103988.1-201ENST00000566382 2177 ntBASIC3.38□□□□□ -1.87
USP44Q9H0E7 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.37□□□□□ -1.87
USP44Q9H0E7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
USP44Q9H0E7 AC010680.1-201ENST00000590024 3590 ntBASIC3.37□□□□□ -1.87
USP44Q9H0E7 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
USP44Q9H0E7 Y_RNA.41-201ENST00000362646 102 ntBASIC3.37□□□□□ -1.87
USP44Q9H0E7 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
USP44Q9H0E7 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.37□□□□□ -1.87
USP44Q9H0E7 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.37□□□□□ -1.87
USP44Q9H0E7 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.37□□□□□ -1.87
USP44Q9H0E7 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.37□□□□□ -1.87
USP44Q9H0E7 ISCA1P1-201ENST00000426679 387 ntBASIC3.37□□□□□ -1.87
USP44Q9H0E7 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.37□□□□□ -1.87
USP44Q9H0E7 AC009969.1-201ENST00000438726 172 ntBASIC3.37□□□□□ -1.87
USP44Q9H0E7 MTATP6P30-201ENST00000443540 664 ntBASIC3.37□□□□□ -1.87
USP44Q9H0E7 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.37□□□□□ -1.87
USP44Q9H0E7 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.37□□□□□ -1.87
USP44Q9H0E7 AL135752.1-201ENST00000479477 471 ntBASIC3.37□□□□□ -1.87
USP44Q9H0E7 AC138853.1-201ENST00000503549 823 ntBASIC3.37□□□□□ -1.87
USP44Q9H0E7 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.37□□□□□ -1.87
USP44Q9H0E7 SNORA9.3-201ENST00000516383 129 ntBASIC3.37□□□□□ -1.87
USP44Q9H0E7 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
USP44Q9H0E7 AC090572.1-201ENST00000519251 160 ntBASIC3.37□□□□□ -1.87
USP44Q9H0E7 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.37□□□□□ -1.87
USP44Q9H0E7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.37□□□□□ -1.87
USP44Q9H0E7 AC136601.2-201ENST00000604356 474 ntBASIC3.37□□□□□ -1.87
USP44Q9H0E7 AC007619.2-201ENST00000605743 379 ntBASIC3.37□□□□□ -1.87
USP44Q9H0E7 AC015540.1-201ENST00000615828 501 ntBASIC3.37□□□□□ -1.87
USP44Q9H0E7 CR381653.2-201ENST00000624041 768 ntBASIC3.37□□□□□ -1.87
USP44Q9H0E7 MTND5P42-201ENST00000637720 498 ntBASIC3.37□□□□□ -1.87
USP44Q9H0E7 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.37□□□□□ -1.87
USP44Q9H0E7 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
USP44Q9H0E7 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.37□□□□□ -1.87
USP44Q9H0E7 MTND5P17-201ENST00000418405 1603 ntBASIC3.37□□□□□ -1.87
USP44Q9H0E7 AC092447.7-201ENST00000422212 1621 ntBASIC3.37□□□□□ -1.87
USP44Q9H0E7 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
USP44Q9H0E7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
USP44Q9H0E7 AC110774.1-201ENST00000623567 2018 ntBASIC3.36□□□□□ -1.87
USP44Q9H0E7 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
USP44Q9H0E7 RNU6-140P-201ENST00000384566 108 ntBASIC3.36□□□□□ -1.87
USP44Q9H0E7 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.36□□□□□ -1.87
USP44Q9H0E7 AC063976.3-201ENST00000426849 329 ntBASIC3.36□□□□□ -1.87
USP44Q9H0E7 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.36□□□□□ -1.87
USP44Q9H0E7 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.36□□□□□ -1.87
USP44Q9H0E7 AC126389.1-201ENST00000477436 290 ntBASIC3.36□□□□□ -1.87
USP44Q9H0E7 RPL37P25-201ENST00000507308 276 ntBASIC3.36□□□□□ -1.87
USP44Q9H0E7 ARL4AP2-201ENST00000507378 601 ntBASIC3.36□□□□□ -1.87
USP44Q9H0E7 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.36□□□□□ -1.87
USP44Q9H0E7 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.36□□□□□ -1.87
USP44Q9H0E7 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.36□□□□□ -1.87
USP44Q9H0E7 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.36□□□□□ -1.87
USP44Q9H0E7 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.36□□□□□ -1.87
USP44Q9H0E7 AL161798.1-201ENST00000604630 131 ntBASIC3.36□□□□□ -1.87
USP44Q9H0E7 FTX_3.1-201ENST00000610451 147 ntBASIC3.36□□□□□ -1.87
USP44Q9H0E7 AC122108.2-201ENST00000611946 526 ntBASIC3.36□□□□□ -1.87
USP44Q9H0E7 AC136475.10-201ENST00000620253 385 ntBASIC3.36□□□□□ -1.87
USP44Q9H0E7 AL589994.2-201ENST00000621124 579 ntBASIC3.36□□□□□ -1.87
USP44Q9H0E7 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.36□□□□□ -1.87
USP44Q9H0E7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
USP44Q9H0E7 SNORA14A-201ENST00000364773 135 ntBASIC3.35□□□□□ -1.87
USP44Q9H0E7 SNORA51.4-201ENST00000364993 124 ntBASIC3.35□□□□□ -1.87
USP44Q9H0E7 SMIM11P1-201ENST00000369586 178 ntBASIC3.35□□□□□ -1.87
USP44Q9H0E7 RNU6-946P-201ENST00000383878 107 ntBASIC3.35□□□□□ -1.87
USP44Q9H0E7 RNU6-14P-201ENST00000384630 106 ntBASIC3.35□□□□□ -1.87
USP44Q9H0E7 MIR34A-201ENST00000385130 110 ntBASIC3.35□□□□□ -1.87
USP44Q9H0E7 MIR325-201ENST00000385260 98 ntBASIC3.35□□□□□ -1.87
USP44Q9H0E7 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
USP44Q9H0E7 MIR888-201ENST00000401186 77 ntBASIC3.35□□□□□ -1.87
USP44Q9H0E7 RNA5SP184-201ENST00000411071 108 ntBASIC3.35□□□□□ -1.87
USP44Q9H0E7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.35□□□□□ -1.87
USP44Q9H0E7 MRPL50P2-201ENST00000416821 482 ntBASIC3.35□□□□□ -1.87
USP44Q9H0E7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.35□□□□□ -1.87
USP44Q9H0E7 RPL31P35-201ENST00000431058 377 ntBASIC3.35□□□□□ -1.87
USP44Q9H0E7 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.35□□□□□ -1.87
USP44Q9H0E7 AC079448.1-201ENST00000449377 373 ntBASIC3.35□□□□□ -1.87
USP44Q9H0E7 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.35□□□□□ -1.87
USP44Q9H0E7 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.35□□□□□ -1.87
USP44Q9H0E7 AC092185.1-201ENST00000491371 97 ntBASIC3.35□□□□□ -1.87
USP44Q9H0E7 AC023194.1-201ENST00000493084 308 ntBASIC3.35□□□□□ -1.87
USP44Q9H0E7 RNU6-720P-201ENST00000516363 108 ntBASIC3.35□□□□□ -1.87
USP44Q9H0E7 RNU6-1220P-201ENST00000517126 108 ntBASIC3.35□□□□□ -1.87
USP44Q9H0E7 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
USP44Q9H0E7 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.35□□□□□ -1.87
USP44Q9H0E7 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms