Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AP005639.2-201ENST00000527592 928 ntBASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 MIR5690-201ENST00000583739 73 ntBASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 AC005255.1-201ENST00000593748 216 ntBASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 AC091167.4-201ENST00000605079 184 ntBASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 AC110741.2-201ENST00000605278 268 ntBASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 MIR6875-201ENST00000617506 72 ntBASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 AC134503.1-201ENST00000633048 54 ntBASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 TNPO1P3-201ENST00000436471 2662 ntBASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 ZNF285B-201ENST00000561698 1767 ntBASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 MIR208A-201ENST00000362287 71 ntBASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 SNORA63.1-201ENST00000362493 131 ntBASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 Y_RNA.128-201ENST00000363391 112 ntBASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 RNU6-512P-201ENST00000364438 103 ntBASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 RNA5SP167-201ENST00000365461 116 ntBASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 RNU6-128P-201ENST00000383976 107 ntBASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 Y_RNA.482-201ENST00000384377 111 ntBASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 AL360182.1-201ENST00000397433 468 ntBASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 BTF3L4P3-201ENST00000418879 476 ntBASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 YME1L1P1-201ENST00000429435 297 ntBASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 SNAP23P1-201ENST00000433229 246 ntBASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 BRK1P2-201ENST00000442875 223 ntBASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 AC117503.1-201ENST00000472241 394 ntBASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 RPL31P60-201ENST00000478450 367 ntBASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 AC096576.1-201ENST00000489014 359 ntBASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 AC079140.5-201ENST00000507882 310 ntBASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 SCARNA15.2-201ENST00000516409 127 ntBASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 Vault.1-201ENST00000516474 102 ntBASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 RNA5SP179-201ENST00000517284 121 ntBASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 RNU6-323P-201ENST00000521915 107 ntBASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 APOOP3-201ENST00000536787 586 ntBASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 YPEL5P3-201ENST00000547227 352 ntBASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 IMMP1LP2-201ENST00000552954 492 ntBASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 AP002826.1-201ENST00000608835 315 ntBASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 FAM157A-202ENST00000615155 405 ntBASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 MTND4P27-201ENST00000450813 1354 ntBASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
AMBRA1Q9C0C7 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.59□□□□□ -1.84
AMBRA1Q9C0C7 ZNF519P1-201ENST00000449011 1626 ntBASIC3.59□□□□□ -1.84
AMBRA1Q9C0C7 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
AMBRA1Q9C0C7 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 MIR372-201ENST00000362225 67 ntBASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 RNU6-562P-201ENST00000362731 107 ntBASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 RNU6-1167P-201ENST00000363227 94 ntBASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 Y_RNA.135-201ENST00000363439 95 ntBASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 SNORD42.2-201ENST00000365570 69 ntBASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 Y_RNA.480-201ENST00000384364 102 ntBASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 RNY4P36-201ENST00000391116 96 ntBASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 MTCYBP4-201ENST00000401524 249 ntBASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 RNU6-1304P-201ENST00000411374 106 ntBASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 AC063979.1-201ENST00000415539 377 ntBASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 SKA2P1-201ENST00000425592 390 ntBASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 AC091390.3-201ENST00000426478 338 ntBASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 AL356867.1-201ENST00000429623 299 ntBASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 AL133547.1-201ENST00000448546 220 ntBASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 AC087884.1-201ENST00000469738 328 ntBASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 AC078817.1-201ENST00000492623 435 ntBASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 AC005741.1-201ENST00000511094 432 ntBASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 RNU6-1332P-201ENST00000516666 104 ntBASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 AC020661.2-201ENST00000560114 134 ntBASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 AC098826.3-201ENST00000603823 466 ntBASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 AC080078.3-201ENST00000605407 463 ntBASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 AL627309.6-201ENST00000606857 840 ntBASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.58□□□□□ -1.84
AMBRA1Q9C0C7 AC107294.1-201ENST00000609524 467 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms