Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 RNU6-472P-201ENST00000384299 107 ntBASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 SNORD73A-201ENST00000386062 65 ntBASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 AL138885.1-201ENST00000405921 675 ntBASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 AL030996.1-201ENST00000411430 235 ntBASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 AL356968.1-201ENST00000416622 474 ntBASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 CKS1BP5-201ENST00000434172 273 ntBASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 DYNLT3P2-201ENST00000442517 295 ntBASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 CHEK2P4-201ENST00000450340 246 ntBASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 RPL23AP31-201ENST00000456160 467 ntBASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 RN7SL303P-201ENST00000469773 251 ntBASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 AC022447.4-201ENST00000504053 364 ntBASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 AC025554.1-201ENST00000505641 188 ntBASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 SNORA31.9-201ENST00000516429 84 ntBASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 MIR3160-1-201ENST00000577972 85 ntBASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 HMGB1P50-201ENST00000605814 607 ntBASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 AL021997.2-201ENST00000615674 271 ntBASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
FOXP3Q9BZS1 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
FOXP3Q9BZS1 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.7
FOXP3Q9BZS1 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
FOXP3Q9BZS1 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
FOXP3Q9BZS1 RNA5SP175-201ENST00000364275 119 ntBASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 Y_RNA.276-201ENST00000364732 109 ntBASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 SNORA36C-201ENST00000384289 132 ntBASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 MIR153-1-201ENST00000384914 90 ntBASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 AL445529.1-201ENST00000398713 389 ntBASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 MIR1179-201ENST00000408703 91 ntBASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 RNU2-3P-201ENST00000410144 191 ntBASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 RNA5SP306-201ENST00000411087 107 ntBASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 CYCSP33-201ENST00000414485 327 ntBASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 TMSB10P2-201ENST00000416049 131 ntBASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 AL353621.1-201ENST00000418219 243 ntBASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 AC011998.1-201ENST00000433403 117 ntBASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 AL031274.1-201ENST00000450334 232 ntBASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 RPL23AP2-201ENST00000471227 466 ntBASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 AC093852.1-201ENST00000503587 266 ntBASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 AC074050.1-201ENST00000563247 211 ntBASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 MIR5188-201ENST00000583467 113 ntBASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 OR1M4P-201ENST00000589199 287 ntBASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 AL109918.3-201ENST00000603072 338 ntBASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 AC012603.1-201ENST00000606424 528 ntBASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 AC034102.8-201ENST00000615146 484 ntBASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 MAPK10-373ENST00000641983 6772 ntBASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.71
FOXP3Q9BZS1 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
FOXP3Q9BZS1 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
FOXP3Q9BZS1 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.39□□□□□ -1.71
FOXP3Q9BZS1 RNU4-42P-201ENST00000364738 142 ntBASIC4.39□□□□□ -1.71
FOXP3Q9BZS1 Y_RNA.288-201ENST00000364854 92 ntBASIC4.39□□□□□ -1.71
FOXP3Q9BZS1 RNU6-713P-201ENST00000384761 107 ntBASIC4.39□□□□□ -1.71
FOXP3Q9BZS1 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
FOXP3Q9BZS1 AL603908.1-201ENST00000406098 201 ntBASIC4.39□□□□□ -1.71
FOXP3Q9BZS1 RNU6-1156P-201ENST00000410365 100 ntBASIC4.39□□□□□ -1.71
FOXP3Q9BZS1 AC063979.1-201ENST00000415539 377 ntBASIC4.39□□□□□ -1.71
FOXP3Q9BZS1 RPS15AP6-201ENST00000420703 385 ntBASIC4.39□□□□□ -1.71
FOXP3Q9BZS1 MTATP6P4-201ENST00000427725 675 ntBASIC4.39□□□□□ -1.71
FOXP3Q9BZS1 RPS29P17-201ENST00000430795 166 ntBASIC4.39□□□□□ -1.71
FOXP3Q9BZS1 RPL26P6-201ENST00000440913 438 ntBASIC4.39□□□□□ -1.71
FOXP3Q9BZS1 NUTF2P3-201ENST00000448540 384 ntBASIC4.39□□□□□ -1.71
FOXP3Q9BZS1 RPL35AP15-201ENST00000468042 339 ntBASIC4.39□□□□□ -1.71
FOXP3Q9BZS1 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXP3Q9BZS1 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXP3Q9BZS1 GMPSP1-201ENST00000514075 579 ntBASIC4.39□□□□□ -1.71
FOXP3Q9BZS1 RNU6-1143P-201ENST00000516125 104 ntBASIC4.39□□□□□ -1.71
FOXP3Q9BZS1 RNU6-927P-201ENST00000516199 100 ntBASIC4.39□□□□□ -1.71
FOXP3Q9BZS1 AC023157.2-201ENST00000540596 141 ntBASIC4.39□□□□□ -1.71
FOXP3Q9BZS1 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXP3Q9BZS1 AC007224.1-201ENST00000564410 144 ntBASIC4.39□□□□□ -1.71
FOXP3Q9BZS1 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXP3Q9BZS1 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXP3Q9BZS1 AC064801.1-201ENST00000612025 407 ntBASIC4.39□□□□□ -1.71
FOXP3Q9BZS1 AC023043.4-201ENST00000612081 449 ntBASIC4.39□□□□□ -1.71
FOXP3Q9BZS1 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
FOXP3Q9BZS1 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms