Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 RPL30P13-201ENST00000418873 348 ntBASIC0.93□□□□□ -2.26
LIMD2Q9BT23 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.93□□□□□ -2.26
LIMD2Q9BT23 MTCO2P5-201ENST00000422621 426 ntBASIC0.93□□□□□ -2.26
LIMD2Q9BT23 SLC44A3-AS1-205ENST00000424505 612 ntBASIC0.93□□□□□ -2.26
LIMD2Q9BT23 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.93□□□□□ -2.26
LIMD2Q9BT23 PTGES3P1-201ENST00000439531 483 ntBASIC0.93□□□□□ -2.26
LIMD2Q9BT23 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC0.93□□□□□ -2.26
LIMD2Q9BT23 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.93□□□□□ -2.26
LIMD2Q9BT23 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.93□□□□□ -2.26
LIMD2Q9BT23 OFD1P3Y-201ENST00000453312 783 ntBASIC0.93□□□□□ -2.26
LIMD2Q9BT23 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC0.93□□□□□ -2.26
LIMD2Q9BT23 AC013267.1-201ENST00000458227 267 ntBASIC0.93□□□□□ -2.26
LIMD2Q9BT23 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.93□□□□□ -2.26
LIMD2Q9BT23 AC114801.2-201ENST00000503825 781 ntBASIC0.93□□□□□ -2.26
LIMD2Q9BT23 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC0.93□□□□□ -2.26
LIMD2Q9BT23 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC0.93□□□□□ -2.26
LIMD2Q9BT23 AC117522.2-201ENST00000510049 657 ntBASIC0.93□□□□□ -2.26
LIMD2Q9BT23 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.93□□□□□ -2.26
LIMD2Q9BT23 IGLVVI-22-1-201ENST00000521183 211 ntBASIC0.93□□□□□ -2.26
LIMD2Q9BT23 EEF1A1P37-201ENST00000522748 715 ntBASIC0.93□□□□□ -2.26
LIMD2Q9BT23 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC0.93□□□□□ -2.26
LIMD2Q9BT23 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC0.93□□□□□ -2.26
LIMD2Q9BT23 ROCK1P1-201ENST00000573767 549 ntBASIC0.93□□□□□ -2.26
LIMD2Q9BT23 AL035411.2-201ENST00000604022 421 ntBASIC0.93□□□□□ -2.26
LIMD2Q9BT23 AC004805.2-201ENST00000605382 482 ntBASIC0.93□□□□□ -2.26
LIMD2Q9BT23 AC092953.2-201ENST00000608000 699 ntBASIC0.93□□□□□ -2.26
LIMD2Q9BT23 AC108479.2-201ENST00000617314 601 ntBASIC0.93□□□□□ -2.26
LIMD2Q9BT23 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.93□□□□□ -2.26
LIMD2Q9BT23 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.93□□□□□ -2.26
LIMD2Q9BT23 AL590396.4-201ENST00000636779 956 ntBASIC0.93□□□□□ -2.26
LIMD2Q9BT23 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
LIMD2Q9BT23 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
LIMD2Q9BT23 AP005901.5-201ENST00000545779 1796 ntBASIC0.93□□□□□ -2.26
LIMD2Q9BT23 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC0.93□□□□□ -2.26
LIMD2Q9BT23 UBE2L2-201ENST00000254302 429 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 MIR26B-201ENST00000362251 77 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 RNU1-42P-201ENST00000364033 160 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
LIMD2Q9BT23 RNU6-338P-201ENST00000383888 105 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 RNU6-637P-201ENST00000384050 107 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 Y_RNA.548-201ENST00000384656 105 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 U8.13-201ENST00000390842 128 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 RNU6-754P-201ENST00000391166 107 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 SNORA26.9-201ENST00000391322 122 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 BTF3L4P2-201ENST00000392798 346 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 AL353621.1-201ENST00000418219 243 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 OOSP1P1-201ENST00000423265 274 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 CR848007.2-201ENST00000424918 787 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC0.92□□□□□ -2.26
LIMD2Q9BT23 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.92□□□□□ -2.26
LIMD2Q9BT23 MTCO1P53-201ENST00000441633 699 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.92□□□□□ -2.26
LIMD2Q9BT23 RPL39P6-201ENST00000448289 150 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 MTND1P9-201ENST00000453775 944 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 AC244505.3-201ENST00000454598 187 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 AP001324.2-201ENST00000461163 319 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 RPS15AP17-201ENST00000470598 390 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 AC069528.1-202ENST00000482888 637 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 RPS29P11-201ENST00000496507 171 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 SNORA4.4-201ENST00000515921 135 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 RNU6-548P-201ENST00000517083 115 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 SNORA31.24-201ENST00000517232 57 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.92□□□□□ -2.26
LIMD2Q9BT23 AC079598.5-201ENST00000547460 117 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC0.92□□□□□ -2.26
LIMD2Q9BT23 AC026271.5-201ENST00000577873 130 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.92□□□□□ -2.26
LIMD2Q9BT23 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC0.92□□□□□ -2.26
LIMD2Q9BT23 AC002545.1-201ENST00000592511 181 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 SNRPGP17-201ENST00000603780 214 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 PRR13P7-201ENST00000605538 430 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 AC009318.2-201ENST00000610917 651 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 MIR6845-201ENST00000613182 61 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 AC092192.1-201ENST00000633154 1018 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 Z99571.1-201ENST00000636677 394 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 Z75746.1-201ENST00000440243 2080 ntBASIC0.92□□□□□ -2.26
LIMD2Q9BT23 RNA5SP126-201ENST00000365092 109 ntBASIC0.91□□□□□ -2.26
LIMD2Q9BT23 MIR150-201ENST00000385048 84 ntBASIC0.91□□□□□ -2.26
LIMD2Q9BT23 SNORA67.6-201ENST00000391093 99 ntBASIC0.91□□□□□ -2.26
LIMD2Q9BT23 AL627390.1-201ENST00000396055 340 ntBASIC0.91□□□□□ -2.26
LIMD2Q9BT23 MIR1283-2-201ENST00000408621 87 ntBASIC0.91□□□□□ -2.26
LIMD2Q9BT23 AC127391.1-201ENST00000411737 98 ntBASIC0.91□□□□□ -2.26
LIMD2Q9BT23 PTGES3P4-201ENST00000426243 356 ntBASIC0.91□□□□□ -2.26
LIMD2Q9BT23 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC0.91□□□□□ -2.26
LIMD2Q9BT23 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.91□□□□□ -2.26
LIMD2Q9BT23 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.91□□□□□ -2.26
LIMD2Q9BT23 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC0.91□□□□□ -2.26
LIMD2Q9BT23 MTND1P28-201ENST00000435623 950 ntBASIC0.91□□□□□ -2.26
LIMD2Q9BT23 HSPE1P24-201ENST00000450782 238 ntBASIC0.91□□□□□ -2.26
LIMD2Q9BT23 KATNBL1P6-201ENST00000453433 915 ntBASIC0.91□□□□□ -2.26
LIMD2Q9BT23 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.91□□□□□ -2.26
LIMD2Q9BT23 RPS29P23-201ENST00000458635 123 ntBASIC0.91□□□□□ -2.26
LIMD2Q9BT23 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.91□□□□□ -2.26
LIMD2Q9BT23 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC0.91□□□□□ -2.26
LIMD2Q9BT23 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.91□□□□□ -2.26
LIMD2Q9BT23 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.91□□□□□ -2.26
LIMD2Q9BT23 RPL23AP94-201ENST00000512518 302 ntBASIC0.91□□□□□ -2.26
LIMD2Q9BT23 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.91□□□□□ -2.26
LIMD2Q9BT23 SNORA44.1-201ENST00000517031 108 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms