Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 RPS15AP9-201ENST00000439856 381 ntBASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 BTF3P15-201ENST00000455606 336 ntBASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 snoU13.22-201ENST00000459428 104 ntBASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 RPL21P41-201ENST00000459863 264 ntBASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 AC117522.3-201ENST00000507974 584 ntBASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 AC098591.2-201ENST00000510152 315 ntBASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 AC091133.4-201ENST00000511142 308 ntBASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 AC006199.1-201ENST00000548728 219 ntBASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 AC008945.2-201ENST00000606056 604 ntBASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 AP001486.3-201ENST00000615334 372 ntBASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 AL355365.1-201ENST00000616480 294 ntBASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 AL355596.1-201ENST00000565399 3996 ntBASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 AC017071.1-201ENST00000564407 2204 ntBASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HERPUD2Q9BSE4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 ZNF680P1-201ENST00000436625 1469 ntBASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 RNU6-166P-201ENST00000384371 107 ntBASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 RNU4-55P-201ENST00000410731 137 ntBASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 RPL7P37-201ENST00000425095 738 ntBASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 AC010975.2-201ENST00000427781 588 ntBASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 AL596276.1-201ENST00000434465 418 ntBASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 AL161651.1-201ENST00000440882 223 ntBASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 AL162395.1-201ENST00000457882 422 ntBASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 TPTE2P5-203ENST00000458118 728 ntBASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 RPL23AP67-201ENST00000465341 474 ntBASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 RPL23AP14-201ENST00000468281 468 ntBASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 RN7SKP282-201ENST00000516824 299 ntBASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 SNORD19.2-201ENST00000516978 73 ntBASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 CYCSP39-201ENST00000565821 309 ntBASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 AC073534.2-201ENST00000620377 381 ntBASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 AC004944.1-201ENST00000517807 3059 ntBASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 MTND5P26-201ENST00000426018 1752 ntBASIC3.43□□□□□ -1.86
HERPUD2Q9BSE4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 Y_RNA.159-201ENST00000363674 87 ntBASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 RNU1-33P-201ENST00000364249 162 ntBASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 Y_RNA.318-201ENST00000365131 97 ntBASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 SNORA70.4-201ENST00000365509 134 ntBASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 RNU6-1179P-201ENST00000384667 107 ntBASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 RNU6-550P-201ENST00000391057 101 ntBASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 RNA5SP293-201ENST00000410527 113 ntBASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 MTCO3P41-201ENST00000414801 328 ntBASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 AL513477.1-202ENST00000417061 214 ntBASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 DLGAP5P1-201ENST00000430307 464 ntBASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 AC005019.1-201ENST00000436455 431 ntBASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 OSTCP8-201ENST00000445117 448 ntBASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 AL583843.1-201ENST00000456070 346 ntBASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 AC008155.2-201ENST00000464337 397 ntBASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 AC022493.1-201ENST00000492984 337 ntBASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 AC112206.3-201ENST00000514578 389 ntBASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 SNORA64.4-201ENST00000516632 81 ntBASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 OR5BN1P-201ENST00000532955 829 ntBASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 AC011471.1-201ENST00000585766 187 ntBASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 AC005261.5-201ENST00000596280 355 ntBASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 AC006557.5-201ENST00000603126 811 ntBASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 AC012507.3-201ENST00000603556 477 ntBASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 AL136363.2-201ENST00000604173 851 ntBASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 HULC.1-201ENST00000612720 240 ntBASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 AC005609.4-201ENST00000625071 447 ntBASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.42□□□□□ -1.86
HERPUD2Q9BSE4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 RNU6-1280P-201ENST00000365211 107 ntBASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 RNU6-898P-201ENST00000365627 104 ntBASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 RN7SKP220-201ENST00000410611 288 ntBASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 Y_RNA.623-201ENST00000411128 95 ntBASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 RPL21P90-201ENST00000415692 466 ntBASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 MORF4L1P6-201ENST00000418771 268 ntBASIC3.41□□□□□ -1.86
HERPUD2Q9BSE4 AC097713.2-201ENST00000430199 356 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms