Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.35□□□□□ -2.03
EBF4Q9BQW3 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.35□□□□□ -2.03
EBF4Q9BQW3 TRAV28-201ENST00000557548 323 ntBASIC2.35□□□□□ -2.03
EBF4Q9BQW3 AC009063.1-201ENST00000563342 702 ntBASIC2.35□□□□□ -2.03
EBF4Q9BQW3 MIR3146-201ENST00000580367 79 ntBASIC2.35□□□□□ -2.03
EBF4Q9BQW3 MIR3118-1-201ENST00000581787 76 ntBASIC2.35□□□□□ -2.03
EBF4Q9BQW3 AC005771.1-201ENST00000585581 349 ntBASIC2.35□□□□□ -2.03
EBF4Q9BQW3 AC009977.1-201ENST00000586015 570 ntBASIC2.35□□□□□ -2.03
EBF4Q9BQW3 HMGN1P30-201ENST00000589286 268 ntBASIC2.35□□□□□ -2.03
EBF4Q9BQW3 GLUD1P4-201ENST00000590914 418 ntBASIC2.35□□□□□ -2.03
EBF4Q9BQW3 AC002545.1-201ENST00000592511 181 ntBASIC2.35□□□□□ -2.03
EBF4Q9BQW3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.35□□□□□ -2.03
EBF4Q9BQW3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.35□□□□□ -2.03
EBF4Q9BQW3 AP000860.1-201ENST00000605250 559 ntBASIC2.35□□□□□ -2.03
EBF4Q9BQW3 AL161734.1-201ENST00000609720 557 ntBASIC2.35□□□□□ -2.03
EBF4Q9BQW3 AC068792.1-201ENST00000621354 417 ntBASIC2.35□□□□□ -2.03
EBF4Q9BQW3 AC091953.2-201ENST00000623979 160 ntBASIC2.35□□□□□ -2.03
EBF4Q9BQW3 AL160394.1-201ENST00000624765 724 ntBASIC2.35□□□□□ -2.03
EBF4Q9BQW3 MTND1P37-201ENST00000636562 264 ntBASIC2.35□□□□□ -2.03
EBF4Q9BQW3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
EBF4Q9BQW3 MTND5P29-201ENST00000458676 1807 ntBASIC2.35□□□□□ -2.03
EBF4Q9BQW3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
EBF4Q9BQW3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
EBF4Q9BQW3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
EBF4Q9BQW3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.34□□□□□ -2.03
EBF4Q9BQW3 RNU6-741P-201ENST00000383889 107 ntBASIC2.34□□□□□ -2.03
EBF4Q9BQW3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
EBF4Q9BQW3 RNU2-33P-201ENST00000410344 192 ntBASIC2.34□□□□□ -2.03
EBF4Q9BQW3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.34□□□□□ -2.03
EBF4Q9BQW3 AC092047.1-201ENST00000424997 240 ntBASIC2.34□□□□□ -2.03
EBF4Q9BQW3 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.34□□□□□ -2.03
EBF4Q9BQW3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.34□□□□□ -2.03
EBF4Q9BQW3 FCF1P1-201ENST00000432690 571 ntBASIC2.34□□□□□ -2.03
EBF4Q9BQW3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.34□□□□□ -2.03
EBF4Q9BQW3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.34□□□□□ -2.03
EBF4Q9BQW3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.34□□□□□ -2.03
EBF4Q9BQW3 AC244505.5-201ENST00000443639 207 ntBASIC2.34□□□□□ -2.03
EBF4Q9BQW3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.34□□□□□ -2.03
EBF4Q9BQW3 DDX3P2-201ENST00000446138 111 ntBASIC2.34□□□□□ -2.03
EBF4Q9BQW3 AL513328.1-201ENST00000446460 224 ntBASIC2.34□□□□□ -2.03
EBF4Q9BQW3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.34□□□□□ -2.03
EBF4Q9BQW3 USP9YP12-201ENST00000450481 570 ntBASIC2.34□□□□□ -2.03
EBF4Q9BQW3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.34□□□□□ -2.03
EBF4Q9BQW3 SSXP1-201ENST00000453640 473 ntBASIC2.34□□□□□ -2.03
EBF4Q9BQW3 RNU6-420P-201ENST00000458780 107 ntBASIC2.34□□□□□ -2.03
EBF4Q9BQW3 snoU13.28-201ENST00000459235 104 ntBASIC2.34□□□□□ -2.03
EBF4Q9BQW3 RPS20P22-201ENST00000473700 357 ntBASIC2.34□□□□□ -2.03
EBF4Q9BQW3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
EBF4Q9BQW3 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.34□□□□□ -2.03
EBF4Q9BQW3 NDUFB4P2-201ENST00000509515 391 ntBASIC2.34□□□□□ -2.03
EBF4Q9BQW3 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.34□□□□□ -2.03
EBF4Q9BQW3 RN7SKP132-201ENST00000516001 208 ntBASIC2.34□□□□□ -2.03
EBF4Q9BQW3 RNU6-720P-201ENST00000516363 108 ntBASIC2.34□□□□□ -2.03
EBF4Q9BQW3 RNU6-405P-201ENST00000516637 110 ntBASIC2.34□□□□□ -2.03
EBF4Q9BQW3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
EBF4Q9BQW3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.34□□□□□ -2.03
EBF4Q9BQW3 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.34□□□□□ -2.03
EBF4Q9BQW3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.34□□□□□ -2.03
EBF4Q9BQW3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.34□□□□□ -2.03
EBF4Q9BQW3 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.34□□□□□ -2.03
EBF4Q9BQW3 RPL23AP84-201ENST00000571193 464 ntBASIC2.34□□□□□ -2.03
EBF4Q9BQW3 MIR4325-201ENST00000583049 90 ntBASIC2.34□□□□□ -2.03
EBF4Q9BQW3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.34□□□□□ -2.03
EBF4Q9BQW3 AC079089.3-201ENST00000603094 673 ntBASIC2.34□□□□□ -2.03
EBF4Q9BQW3 NUTF2P8-201ENST00000604593 363 ntBASIC2.34□□□□□ -2.03
EBF4Q9BQW3 AC067747.1-201ENST00000608026 250 ntBASIC2.34□□□□□ -2.03
EBF4Q9BQW3 AL589743.7-201ENST00000612637 233 ntBASIC2.34□□□□□ -2.03
EBF4Q9BQW3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.34□□□□□ -2.03
EBF4Q9BQW3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
EBF4Q9BQW3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
EBF4Q9BQW3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.34□□□□□ -2.04
EBF4Q9BQW3 AC099654.7-201ENST00000635788 2127 ntBASIC2.33□□□□□ -2.04
EBF4Q9BQW3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
EBF4Q9BQW3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.33□□□□□ -2.04
EBF4Q9BQW3 RNY3P13-201ENST00000365542 102 ntBASIC2.33□□□□□ -2.04
EBF4Q9BQW3 RNU6-1035P-201ENST00000384477 107 ntBASIC2.33□□□□□ -2.04
EBF4Q9BQW3 SNORD115.1-201ENST00000391109 76 ntBASIC2.33□□□□□ -2.04
EBF4Q9BQW3 SNORA11-201ENST00000408789 128 ntBASIC2.33□□□□□ -2.04
EBF4Q9BQW3 Y_RNA.608-201ENST00000410647 95 ntBASIC2.33□□□□□ -2.04
EBF4Q9BQW3 AC099548.1-201ENST00000421443 426 ntBASIC2.33□□□□□ -2.04
EBF4Q9BQW3 AL589872.1-201ENST00000426602 288 ntBASIC2.33□□□□□ -2.04
EBF4Q9BQW3 AC010975.2-201ENST00000427781 588 ntBASIC2.33□□□□□ -2.04
EBF4Q9BQW3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.33□□□□□ -2.04
EBF4Q9BQW3 USP12PX-201ENST00000432383 1057 ntBASIC2.33□□□□□ -2.04
EBF4Q9BQW3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.33□□□□□ -2.04
EBF4Q9BQW3 RPL22P17-201ENST00000438729 315 ntBASIC2.33□□□□□ -2.04
EBF4Q9BQW3 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.33□□□□□ -2.04
EBF4Q9BQW3 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
EBF4Q9BQW3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.33□□□□□ -2.04
EBF4Q9BQW3 AC108059.3-201ENST00000456388 214 ntBASIC2.33□□□□□ -2.04
EBF4Q9BQW3 SNORD42A-201ENST00000459584 64 ntBASIC2.33□□□□□ -2.04
EBF4Q9BQW3 AC112204.1-201ENST00000502591 103 ntBASIC2.33□□□□□ -2.04
EBF4Q9BQW3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.33□□□□□ -2.04
EBF4Q9BQW3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.33□□□□□ -2.04
EBF4Q9BQW3 AC096725.1-201ENST00000514266 313 ntBASIC2.33□□□□□ -2.04
EBF4Q9BQW3 RNA5SP320-201ENST00000516263 124 ntBASIC2.33□□□□□ -2.04
EBF4Q9BQW3 RNU6-1282P-201ENST00000516735 96 ntBASIC2.33□□□□□ -2.04
EBF4Q9BQW3 RNU2-46P-201ENST00000517038 113 ntBASIC2.33□□□□□ -2.04
EBF4Q9BQW3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.33□□□□□ -2.04
EBF4Q9BQW3 AP003392.2-201ENST00000527269 208 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms