Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 USP9YP20-201ENST00000419224 558 ntBASIC2.08□□□□□ -2.08
FOXC2Q99958 AC083875.1-201ENST00000419509 405 ntBASIC2.08□□□□□ -2.08
FOXC2Q99958 MICF-203ENST00000432679 129 ntBASIC2.08□□□□□ -2.08
FOXC2Q99958 MTND1P28-201ENST00000435623 950 ntBASIC2.08□□□□□ -2.08
FOXC2Q99958 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.08□□□□□ -2.08
FOXC2Q99958 AP000542.1-201ENST00000448473 371 ntBASIC2.08□□□□□ -2.08
FOXC2Q99958 CECR9-201ENST00000453421 199 ntBASIC2.08□□□□□ -2.08
FOXC2Q99958 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.08□□□□□ -2.08
FOXC2Q99958 RNU7-26P-201ENST00000458980 63 ntBASIC2.08□□□□□ -2.08
FOXC2Q99958 TRBV1-201ENST00000476502 284 ntBASIC2.08□□□□□ -2.08
FOXC2Q99958 RBM43P1-201ENST00000476891 1081 ntBASIC2.08□□□□□ -2.08
FOXC2Q99958 AC093281.2-201ENST00000510153 597 ntBASIC2.08□□□□□ -2.08
FOXC2Q99958 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.08□□□□□ -2.08
FOXC2Q99958 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.08□□□□□ -2.08
FOXC2Q99958 RNA5SP281-201ENST00000516504 135 ntBASIC2.08□□□□□ -2.08
FOXC2Q99958 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.08□□□□□ -2.08
FOXC2Q99958 AC021269.2-201ENST00000532318 330 ntBASIC2.08□□□□□ -2.08
FOXC2Q99958 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.08□□□□□ -2.08
FOXC2Q99958 AL133153.1-201ENST00000557756 303 ntBASIC2.08□□□□□ -2.08
FOXC2Q99958 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.08□□□□□ -2.08
FOXC2Q99958 AC026464.5-201ENST00000562497 722 ntBASIC2.08□□□□□ -2.08
FOXC2Q99958 AL158211.1-201ENST00000566763 763 ntBASIC2.08□□□□□ -2.08
FOXC2Q99958 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.08□□□□□ -2.08
FOXC2Q99958 AL031281.1-201ENST00000604049 488 ntBASIC2.08□□□□□ -2.08
FOXC2Q99958 Z99289.3-201ENST00000605586 594 ntBASIC2.08□□□□□ -2.08
FOXC2Q99958 RNU6-88P-201ENST00000606801 100 ntBASIC2.08□□□□□ -2.08
FOXC2Q99958 OR10AB1P-201ENST00000609613 938 ntBASIC2.08□□□□□ -2.08
FOXC2Q99958 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.08□□□□□ -2.08
FOXC2Q99958 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.08□□□□□ -2.08
FOXC2Q99958 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.08□□□□□ -2.08
FOXC2Q99958 AC097655.1-201ENST00000635075 318 ntBASIC2.08□□□□□ -2.08
FOXC2Q99958 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.08□□□□□ -2.08
FOXC2Q99958 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
FOXC2Q99958 MTND5P33-201ENST00000571250 1450 ntBASIC2.07□□□□□ -2.08
FOXC2Q99958 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
FOXC2Q99958 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.07□□□□□ -2.08
FOXC2Q99958 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
FOXC2Q99958 RNU1-100P-201ENST00000365255 165 ntBASIC2.07□□□□□ -2.08
FOXC2Q99958 RNU6-723P-201ENST00000383973 107 ntBASIC2.07□□□□□ -2.08
FOXC2Q99958 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.07□□□□□ -2.08
FOXC2Q99958 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.07□□□□□ -2.08
FOXC2Q99958 RPL21P24-201ENST00000413752 448 ntBASIC2.07□□□□□ -2.08
FOXC2Q99958 BTF3L4P3-201ENST00000418879 476 ntBASIC2.07□□□□□ -2.08
FOXC2Q99958 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.07□□□□□ -2.08
FOXC2Q99958 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.07□□□□□ -2.08
FOXC2Q99958 AL022400.1-201ENST00000423946 935 ntBASIC2.07□□□□□ -2.08
FOXC2Q99958 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.07□□□□□ -2.08
FOXC2Q99958 MRPL50P4-201ENST00000446432 475 ntBASIC2.07□□□□□ -2.08
FOXC2Q99958 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.07□□□□□ -2.08
FOXC2Q99958 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.07□□□□□ -2.08
FOXC2Q99958 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.07□□□□□ -2.08
FOXC2Q99958 RPL9P6-201ENST00000492764 598 ntBASIC2.07□□□□□ -2.08
FOXC2Q99958 MTND5P4-201ENST00000514978 288 ntBASIC2.07□□□□□ -2.08
FOXC2Q99958 RNU6-1129P-201ENST00000515964 104 ntBASIC2.07□□□□□ -2.08
FOXC2Q99958 SNORA31.15-201ENST00000516771 132 ntBASIC2.07□□□□□ -2.08
FOXC2Q99958 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.07□□□□□ -2.08
FOXC2Q99958 AC093012.1-202ENST00000549403 582 ntBASIC2.07□□□□□ -2.08
FOXC2Q99958 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
FOXC2Q99958 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.07□□□□□ -2.08
FOXC2Q99958 AC090888.2-201ENST00000559765 1144 ntBASIC2.07□□□□□ -2.08
FOXC2Q99958 ISCA1P3-201ENST00000577104 373 ntBASIC2.07□□□□□ -2.08
FOXC2Q99958 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.07□□□□□ -2.08
FOXC2Q99958 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.07□□□□□ -2.08
FOXC2Q99958 BNIP3P8-201ENST00000597863 560 ntBASIC2.07□□□□□ -2.08
FOXC2Q99958 AL356575.1-201ENST00000603008 283 ntBASIC2.07□□□□□ -2.08
FOXC2Q99958 AL391813.1-201ENST00000603098 260 ntBASIC2.07□□□□□ -2.08
FOXC2Q99958 AC004908.2-201ENST00000609090 574 ntBASIC2.07□□□□□ -2.08
FOXC2Q99958 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.07□□□□□ -2.08
FOXC2Q99958 AC025594.3-201ENST00000613068 790 ntBASIC2.07□□□□□ -2.08
FOXC2Q99958 MIR6873-201ENST00000622788 63 ntBASIC2.07□□□□□ -2.08
FOXC2Q99958 AC007490.1-201ENST00000624321 703 ntBASIC2.07□□□□□ -2.08
FOXC2Q99958 AC079416.3-201ENST00000624479 549 ntBASIC2.07□□□□□ -2.08
FOXC2Q99958 MIR3199-2-201ENST00000636243 86 ntBASIC2.07□□□□□ -2.08
FOXC2Q99958 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.07□□□□□ -2.08
FOXC2Q99958 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
FOXC2Q99958 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
FOXC2Q99958 AC093536.2-201ENST00000565257 1406 ntBASIC2.07□□□□□ -2.08
FOXC2Q99958 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
FOXC2Q99958 AL355596.1-201ENST00000565399 3996 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.06□□□□□ -2.08
FOXC2Q99958 RNU6-1167P-201ENST00000363227 94 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 Y_RNA.164-201ENST00000363709 102 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 RNA5SP88-201ENST00000365560 109 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 DEFA7P-201ENST00000382676 285 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 RNU6-220P-201ENST00000390919 107 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 MIR1305-201ENST00000408300 86 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 RPL26P27-201ENST00000414397 437 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 MTND1P20-201ENST00000430341 950 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 AC010153.1-201ENST00000432862 727 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 AL008629.1-201ENST00000438615 184 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 MTATP6P30-201ENST00000443540 664 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 AL591719.1-201ENST00000444669 744 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 ELOCP30-201ENST00000447108 299 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.06□□□□□ -2.08
FOXC2Q99958 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.06□□□□□ -2.08
FOXC2Q99958 AC068587.2-201ENST00000478386 781 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 AC132942.1-201ENST00000486753 483 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.06□□□□□ -2.08
FOXC2Q99958 RPL37P25-201ENST00000507308 276 ntBASIC2.06□□□□□ -2.08
FOXC2Q99958 AC023141.11-201ENST00000508864 202 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms