Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
NPAS2Q99743 AC103706.2-201ENST00000638080 240 ntBASIC2.33□□□□□ -2.04
NPAS2Q99743 MTND5P30-201ENST00000452896 1731 ntBASIC2.33□□□□□ -2.04
NPAS2Q99743 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
NPAS2Q99743 AC005336.3-201ENST00000623833 2679 ntBASIC2.33□□□□□ -2.04
NPAS2Q99743 Z82209.1-201ENST00000422141 2135 ntBASIC2.32□□□□□ -2.04
NPAS2Q99743 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
NPAS2Q99743 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.32□□□□□ -2.04
NPAS2Q99743 SNORA38-201ENST00000363946 132 ntBASIC2.32□□□□□ -2.04
NPAS2Q99743 SNORA67.1-201ENST00000364749 141 ntBASIC2.32□□□□□ -2.04
NPAS2Q99743 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.32□□□□□ -2.04
NPAS2Q99743 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.32□□□□□ -2.04
NPAS2Q99743 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.32□□□□□ -2.04
NPAS2Q99743 RNU6-920P-201ENST00000410926 92 ntBASIC2.32□□□□□ -2.04
NPAS2Q99743 AF274854.1-201ENST00000413236 615 ntBASIC2.32□□□□□ -2.04
NPAS2Q99743 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
NPAS2Q99743 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
NPAS2Q99743 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.32□□□□□ -2.04
NPAS2Q99743 RPL7P36-201ENST00000444633 681 ntBASIC2.32□□□□□ -2.04
NPAS2Q99743 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
NPAS2Q99743 GZMAP1-201ENST00000503054 631 ntBASIC2.32□□□□□ -2.04
NPAS2Q99743 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
NPAS2Q99743 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.32□□□□□ -2.04
NPAS2Q99743 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
NPAS2Q99743 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.32□□□□□ -2.04
NPAS2Q99743 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.32□□□□□ -2.04
NPAS2Q99743 OR4R1P-201ENST00000529879 463 ntBASIC2.32□□□□□ -2.04
NPAS2Q99743 AC010186.2-204ENST00000537668 439 ntBASIC2.32□□□□□ -2.04
NPAS2Q99743 PRELID2P1-201ENST00000552837 301 ntBASIC2.32□□□□□ -2.04
NPAS2Q99743 RPS3AP4-201ENST00000555161 764 ntBASIC2.32□□□□□ -2.04
NPAS2Q99743 MIR3199-1-201ENST00000582434 88 ntBASIC2.32□□□□□ -2.04
NPAS2Q99743 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.32□□□□□ -2.04
NPAS2Q99743 AC091965.4-201ENST00000607691 587 ntBASIC2.32□□□□□ -2.04
NPAS2Q99743 uc_338.14-201ENST00000613162 166 ntBASIC2.32□□□□□ -2.04
NPAS2Q99743 MIR6715A-201ENST00000615929 79 ntBASIC2.32□□□□□ -2.04
NPAS2Q99743 AC021755.4-201ENST00000616620 456 ntBASIC2.32□□□□□ -2.04
NPAS2Q99743 AC009159.2-201ENST00000617603 606 ntBASIC2.32□□□□□ -2.04
NPAS2Q99743 U4.3-201ENST00000621047 82 ntBASIC2.32□□□□□ -2.04
NPAS2Q99743 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
NPAS2Q99743 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.32□□□□□ -2.04
NPAS2Q99743 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NPAS2Q99743 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NPAS2Q99743 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.31□□□□□ -2.04
NPAS2Q99743 RNU1-52P-201ENST00000384190 164 ntBASIC2.31□□□□□ -2.04
NPAS2Q99743 SNORA80E-201ENST00000384744 137 ntBASIC2.31□□□□□ -2.04
NPAS2Q99743 NDUFS5P1-201ENST00000405668 289 ntBASIC2.31□□□□□ -2.04
NPAS2Q99743 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.31□□□□□ -2.04
NPAS2Q99743 VPS26BP1-201ENST00000417155 755 ntBASIC2.31□□□□□ -2.04
NPAS2Q99743 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
NPAS2Q99743 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.31□□□□□ -2.04
NPAS2Q99743 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.31□□□□□ -2.04
NPAS2Q99743 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.31□□□□□ -2.04
NPAS2Q99743 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.31□□□□□ -2.04
NPAS2Q99743 AC080013.2-201ENST00000460866 323 ntBASIC2.31□□□□□ -2.04
NPAS2Q99743 AL121769.1-201ENST00000469473 401 ntBASIC2.31□□□□□ -2.04
NPAS2Q99743 AP000852.1-201ENST00000472460 573 ntBASIC2.31□□□□□ -2.04
NPAS2Q99743 TRBV12-1-201ENST00000479785 344 ntBASIC2.31□□□□□ -2.04
NPAS2Q99743 AC104685.1-201ENST00000502445 371 ntBASIC2.31□□□□□ -2.04
NPAS2Q99743 MTCYBP35-201ENST00000503630 1137 ntBASIC2.31□□□□□ -2.04
NPAS2Q99743 RPL37P25-201ENST00000507308 276 ntBASIC2.31□□□□□ -2.04
NPAS2Q99743 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.31□□□□□ -2.04
NPAS2Q99743 AC013828.2-201ENST00000532487 235 ntBASIC2.31□□□□□ -2.04
NPAS2Q99743 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NPAS2Q99743 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.31□□□□□ -2.04
NPAS2Q99743 MIR5571-201ENST00000577998 113 ntBASIC2.31□□□□□ -2.04
NPAS2Q99743 AC104984.5-201ENST00000586878 94 ntBASIC2.31□□□□□ -2.04
NPAS2Q99743 AL355472.4-201ENST00000610233 626 ntBASIC2.31□□□□□ -2.04
NPAS2Q99743 AL136313.1-201ENST00000624804 202 ntBASIC2.31□□□□□ -2.04
NPAS2Q99743 CTSLP2-204ENST00000629029 392 ntBASIC2.31□□□□□ -2.04
NPAS2Q99743 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.31□□□□□ -2.04
NPAS2Q99743 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NPAS2Q99743 AC007336.1-201ENST00000576365 3828 ntBASIC2.31□□□□□ -2.04
NPAS2Q99743 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
NPAS2Q99743 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
NPAS2Q99743 NACAP2-201ENST00000318548 624 ntBASIC2.3□□□□□ -2.04
NPAS2Q99743 RNU6-512P-201ENST00000364438 103 ntBASIC2.3□□□□□ -2.04
NPAS2Q99743 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NPAS2Q99743 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.3□□□□□ -2.04
NPAS2Q99743 RNU1-138P-201ENST00000384093 164 ntBASIC2.3□□□□□ -2.04
NPAS2Q99743 RNU6-1200P-201ENST00000384162 107 ntBASIC2.3□□□□□ -2.04
NPAS2Q99743 RNU6-658P-201ENST00000384606 106 ntBASIC2.3□□□□□ -2.04
NPAS2Q99743 RPS4XP7-201ENST00000406274 780 ntBASIC2.3□□□□□ -2.04
NPAS2Q99743 MIR1261-201ENST00000408659 82 ntBASIC2.3□□□□□ -2.04
NPAS2Q99743 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.3□□□□□ -2.04
NPAS2Q99743 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.3□□□□□ -2.04
NPAS2Q99743 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.3□□□□□ -2.04
NPAS2Q99743 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.3□□□□□ -2.04
NPAS2Q99743 AC010099.3-201ENST00000423896 409 ntBASIC2.3□□□□□ -2.04
NPAS2Q99743 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.3□□□□□ -2.04
NPAS2Q99743 AL161651.1-201ENST00000440882 223 ntBASIC2.3□□□□□ -2.04
NPAS2Q99743 OR6C5P-201ENST00000452388 923 ntBASIC2.3□□□□□ -2.04
NPAS2Q99743 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.3□□□□□ -2.04
NPAS2Q99743 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.3□□□□□ -2.04
NPAS2Q99743 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.3□□□□□ -2.04
NPAS2Q99743 RPL23AP45-201ENST00000476406 468 ntBASIC2.3□□□□□ -2.04
NPAS2Q99743 AC107222.1-201ENST00000510899 637 ntBASIC2.3□□□□□ -2.04
NPAS2Q99743 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.3□□□□□ -2.04
NPAS2Q99743 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.3□□□□□ -2.04
NPAS2Q99743 AC005261.5-201ENST00000596280 355 ntBASIC2.3□□□□□ -2.04
NPAS2Q99743 AC091152.3-201ENST00000604227 325 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms