Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 OR5H6-203ENST00000642105 978 ntBASIC2.86□□□□□ -1.95
CDCA3Q99618 AC092593.1-201ENST00000515413 1815 ntBASIC2.86□□□□□ -1.95
CDCA3Q99618 TPTE2P4-201ENST00000258589 1605 ntBASIC2.86□□□□□ -1.95
CDCA3Q99618 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CDCA3Q99618 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CDCA3Q99618 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.85□□□□□ -1.95
CDCA3Q99618 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
CDCA3Q99618 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CDCA3Q99618 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CDCA3Q99618 RNU1-35P-201ENST00000362782 153 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 RNU4-24P-201ENST00000364565 139 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 RNU6-169P-201ENST00000365336 107 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 SNORA46-201ENST00000384762 135 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 AL139397.2-201ENST00000404529 772 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 RNA5SP38-201ENST00000410750 119 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.85□□□□□ -1.95
CDCA3Q99618 AC245054.2-201ENST00000415639 319 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.85□□□□□ -1.95
CDCA3Q99618 DLGAP5P1-201ENST00000430307 464 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 VN1R108P-201ENST00000431580 830 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 AL512844.2-201ENST00000433990 593 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 NEFMP1-201ENST00000443423 1006 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 AL136380.1-201ENST00000447970 162 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 AC146507.2-201ENST00000460608 476 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 RPS20P22-201ENST00000473700 357 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 AL135752.1-201ENST00000479477 471 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 RNU6-1092P-201ENST00000516955 87 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 RPL7P20-201ENST00000520308 745 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.85□□□□□ -1.95
CDCA3Q99618 AP003122.3-201ENST00000526316 255 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.85□□□□□ -1.95
CDCA3Q99618 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.85□□□□□ -1.95
CDCA3Q99618 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.85□□□□□ -1.95
CDCA3Q99618 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.85□□□□□ -1.95
CDCA3Q99618 MTCO3P24-201ENST00000572729 782 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.85□□□□□ -1.95
CDCA3Q99618 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.85□□□□□ -1.95
CDCA3Q99618 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.85□□□□□ -1.95
CDCA3Q99618 AL670379.6-201ENST00000603753 252 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 AL670379.11-201ENST00000604059 253 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 AC008162.1-201ENST00000604718 254 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 AL670379.1-201ENST00000604752 252 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 AL670379.5-201ENST00000605253 252 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 AL670379.12-201ENST00000605291 253 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 AL136363.1-201ENST00000605349 337 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 AL670379.8-201ENST00000605353 252 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.85□□□□□ -1.95
CDCA3Q99618 AL670379.7-201ENST00000605823 252 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 AC090115.4-201ENST00000609970 188 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 AC072046.2-201ENST00000618366 268 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.85□□□□□ -1.95
CDCA3Q99618 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.85□□□□□ -1.95
CDCA3Q99618 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.85□□□□□ -1.95
CDCA3Q99618 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CDCA3Q99618 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CDCA3Q99618 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CDCA3Q99618 ZNF658B-202ENST00000615961 3375 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CDCA3Q99618 AL049641.1-201ENST00000441055 1948 ntBASIC2.85□□□□□ -1.95
CDCA3Q99618 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CDCA3Q99618 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
CDCA3Q99618 HSPE1P11-201ENST00000339579 310 ntBASIC2.84□□□□□ -1.95
CDCA3Q99618 U3.6-201ENST00000363622 211 ntBASIC2.84□□□□□ -1.95
CDCA3Q99618 SMIM11P1-201ENST00000369586 178 ntBASIC2.84□□□□□ -1.95
CDCA3Q99618 RNU6-741P-201ENST00000383889 107 ntBASIC2.84□□□□□ -1.95
CDCA3Q99618 RNU6-14P-201ENST00000384630 106 ntBASIC2.84□□□□□ -1.95
CDCA3Q99618 MIR592-201ENST00000384959 97 ntBASIC2.84□□□□□ -1.95
CDCA3Q99618 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.84□□□□□ -1.95
CDCA3Q99618 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.84□□□□□ -1.95
CDCA3Q99618 USP9YP14-201ENST00000430663 563 ntBASIC2.84□□□□□ -1.95
CDCA3Q99618 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.84□□□□□ -1.95
CDCA3Q99618 TPT1P7-201ENST00000458300 517 ntBASIC2.84□□□□□ -1.95
CDCA3Q99618 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.95
CDCA3Q99618 HMGN2P13-201ENST00000476476 274 ntBASIC2.84□□□□□ -1.95
CDCA3Q99618 ARL4AP2-201ENST00000507378 601 ntBASIC2.84□□□□□ -1.95
CDCA3Q99618 MTCO3P7-201ENST00000510008 774 ntBASIC2.84□□□□□ -1.95
CDCA3Q99618 RN7SKP298-201ENST00000515950 94 ntBASIC2.84□□□□□ -1.95
CDCA3Q99618 RN7SKP43-201ENST00000516173 320 ntBASIC2.84□□□□□ -1.95
CDCA3Q99618 RNU6-1282P-201ENST00000516735 96 ntBASIC2.84□□□□□ -1.95
CDCA3Q99618 RNU6-928P-201ENST00000516876 104 ntBASIC2.84□□□□□ -1.95
CDCA3Q99618 RNA5SP291-201ENST00000517222 105 ntBASIC2.84□□□□□ -1.95
CDCA3Q99618 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
CDCA3Q99618 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.84□□□□□ -1.95
CDCA3Q99618 TRAV28-201ENST00000557548 323 ntBASIC2.84□□□□□ -1.95
CDCA3Q99618 GLUD1P4-201ENST00000590914 418 ntBASIC2.84□□□□□ -1.95
CDCA3Q99618 AC245014.2-201ENST00000603689 287 ntBASIC2.84□□□□□ -1.95
CDCA3Q99618 AL161729.4-201ENST00000604650 476 ntBASIC2.84□□□□□ -1.95
CDCA3Q99618 AC246785.4-201ENST00000605374 287 ntBASIC2.84□□□□□ -1.95
CDCA3Q99618 AP002360.4-201ENST00000606980 481 ntBASIC2.84□□□□□ -1.95
CDCA3Q99618 AC109347.2-201ENST00000610220 349 ntBASIC2.84□□□□□ -1.95
CDCA3Q99618 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
CDCA3Q99618 AL589743.7-201ENST00000612637 233 ntBASIC2.84□□□□□ -1.95
CDCA3Q99618 AC011939.3-201ENST00000613686 466 ntBASIC2.84□□□□□ -1.95
CDCA3Q99618 AC091834.1-201ENST00000614543 472 ntBASIC2.84□□□□□ -1.95
CDCA3Q99618 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.84□□□□□ -1.95
CDCA3Q99618 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.84□□□□□ -1.95
CDCA3Q99618 AC084035.1-201ENST00000634543 607 ntBASIC2.84□□□□□ -1.95
CDCA3Q99618 CR848007.1-201ENST00000442354 1699 ntBASIC2.84□□□□□ -1.95
CDCA3Q99618 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.84□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms