Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 AC090186.1-201ENST00000605991 572 ntBASIC1.84□□□□□ -2.11
VAT1Q99536 AP001486.3-201ENST00000615334 372 ntBASIC1.84□□□□□ -2.11
VAT1Q99536 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.84□□□□□ -2.11
VAT1Q99536 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
VAT1Q99536 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.84□□□□□ -2.11
VAT1Q99536 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.84□□□□□ -2.12
VAT1Q99536 RNU6-777P-201ENST00000364265 104 ntBASIC1.83□□□□□ -2.12
VAT1Q99536 AC244035.1-201ENST00000430042 390 ntBASIC1.83□□□□□ -2.12
VAT1Q99536 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.83□□□□□ -2.12
VAT1Q99536 AL161651.1-201ENST00000440882 223 ntBASIC1.83□□□□□ -2.12
VAT1Q99536 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.83□□□□□ -2.12
VAT1Q99536 EEF1E1P1-201ENST00000446998 430 ntBASIC1.83□□□□□ -2.12
VAT1Q99536 ZNF886P-201ENST00000450781 723 ntBASIC1.83□□□□□ -2.12
VAT1Q99536 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.83□□□□□ -2.12
VAT1Q99536 AC068587.2-201ENST00000478386 781 ntBASIC1.83□□□□□ -2.12
VAT1Q99536 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.83□□□□□ -2.12
VAT1Q99536 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.83□□□□□ -2.12
VAT1Q99536 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.83□□□□□ -2.12
VAT1Q99536 OR5AQ1P-201ENST00000527596 927 ntBASIC1.83□□□□□ -2.12
VAT1Q99536 AC024614.2-201ENST00000577584 372 ntBASIC1.83□□□□□ -2.12
VAT1Q99536 MIR3167-201ENST00000579623 85 ntBASIC1.83□□□□□ -2.12
VAT1Q99536 MIR3618-201ENST00000580330 88 ntBASIC1.83□□□□□ -2.12
VAT1Q99536 AC060771.1-201ENST00000582031 164 ntBASIC1.83□□□□□ -2.12
VAT1Q99536 AL096840.1-201ENST00000603287 93 ntBASIC1.83□□□□□ -2.12
VAT1Q99536 AC098826.3-201ENST00000603823 466 ntBASIC1.83□□□□□ -2.12
VAT1Q99536 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.83□□□□□ -2.12
VAT1Q99536 AC103710.2-201ENST00000609912 942 ntBASIC1.83□□□□□ -2.12
VAT1Q99536 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
VAT1Q99536 DUSP12P1-201ENST00000612874 516 ntBASIC1.83□□□□□ -2.12
VAT1Q99536 uc_338.14-201ENST00000613162 166 ntBASIC1.83□□□□□ -2.12
VAT1Q99536 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.83□□□□□ -2.12
VAT1Q99536 AC024581.2-201ENST00000619986 252 ntBASIC1.83□□□□□ -2.12
VAT1Q99536 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
VAT1Q99536 ADAM3A-203ENST00000461344 2157 ntBASIC1.83□□□□□ -2.12
VAT1Q99536 DDX43P2-201ENST00000604753 1354 ntBASIC1.83□□□□□ -2.12
VAT1Q99536 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
VAT1Q99536 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
VAT1Q99536 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.82□□□□□ -2.12
VAT1Q99536 MIR1284-201ENST00000408337 120 ntBASIC1.82□□□□□ -2.12
VAT1Q99536 MIR1294-201ENST00000408503 142 ntBASIC1.82□□□□□ -2.12
VAT1Q99536 RPL21P24-201ENST00000413752 448 ntBASIC1.82□□□□□ -2.12
VAT1Q99536 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.82□□□□□ -2.12
VAT1Q99536 AL353729.1-201ENST00000425044 720 ntBASIC1.82□□□□□ -2.12
VAT1Q99536 SNRPEP7-201ENST00000438350 220 ntBASIC1.82□□□□□ -2.12
VAT1Q99536 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.82□□□□□ -2.12
VAT1Q99536 UBL5P3-201ENST00000475112 231 ntBASIC1.82□□□□□ -2.12
VAT1Q99536 AF213884.2-201ENST00000510417 903 ntBASIC1.82□□□□□ -2.12
VAT1Q99536 RNU6-703P-201ENST00000516946 107 ntBASIC1.82□□□□□ -2.12
VAT1Q99536 NRBF2P1-201ENST00000587407 859 ntBASIC1.82□□□□□ -2.12
VAT1Q99536 AC006270.3-201ENST00000605967 1036 ntBASIC1.82□□□□□ -2.12
VAT1Q99536 RNU6-1192P-201ENST00000612197 107 ntBASIC1.82□□□□□ -2.12
VAT1Q99536 RNU6-489P-201ENST00000618289 107 ntBASIC1.82□□□□□ -2.12
VAT1Q99536 AC091932.3-201ENST00000624223 323 ntBASIC1.82□□□□□ -2.12
VAT1Q99536 AC131280.1-202ENST00000624067 4211 ntBASIC1.82□□□□□ -2.12
VAT1Q99536 AL359854.1-201ENST00000614203 1594 ntBASIC1.81□□□□□ -2.12
VAT1Q99536 RNU6-560P-201ENST00000364007 108 ntBASIC1.81□□□□□ -2.12
VAT1Q99536 MIR9-3-201ENST00000385084 90 ntBASIC1.81□□□□□ -2.12
VAT1Q99536 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
VAT1Q99536 AL030996.1-201ENST00000411430 235 ntBASIC1.81□□□□□ -2.12
VAT1Q99536 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.81□□□□□ -2.12
VAT1Q99536 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.81□□□□□ -2.12
VAT1Q99536 USP9YP11-201ENST00000427537 717 ntBASIC1.81□□□□□ -2.12
VAT1Q99536 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.81□□□□□ -2.12
VAT1Q99536 RPL7P54-201ENST00000438336 674 ntBASIC1.81□□□□□ -2.12
VAT1Q99536 AC016691.1-201ENST00000441321 413 ntBASIC1.81□□□□□ -2.12
VAT1Q99536 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.81□□□□□ -2.12
VAT1Q99536 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.81□□□□□ -2.12
VAT1Q99536 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.81□□□□□ -2.12
VAT1Q99536 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.81□□□□□ -2.12
VAT1Q99536 AC008526.1-201ENST00000509149 338 ntBASIC1.81□□□□□ -2.12
VAT1Q99536 AC093809.1-201ENST00000509155 340 ntBASIC1.81□□□□□ -2.12
VAT1Q99536 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.81□□□□□ -2.12
VAT1Q99536 AL121821.2-201ENST00000556081 394 ntBASIC1.81□□□□□ -2.12
VAT1Q99536 AL133153.1-201ENST00000557756 303 ntBASIC1.81□□□□□ -2.12
VAT1Q99536 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.81□□□□□ -2.12
VAT1Q99536 ROCK1P1-201ENST00000573767 549 ntBASIC1.81□□□□□ -2.12
VAT1Q99536 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.81□□□□□ -2.12
VAT1Q99536 AC009318.2-201ENST00000610917 651 ntBASIC1.81□□□□□ -2.12
VAT1Q99536 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.81□□□□□ -2.12
VAT1Q99536 AP003476.1-201ENST00000623984 516 ntBASIC1.81□□□□□ -2.12
VAT1Q99536 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
VAT1Q99536 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
VAT1Q99536 AL354685.2-201ENST00000448218 1447 ntBASIC1.81□□□□□ -2.12
VAT1Q99536 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
VAT1Q99536 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
VAT1Q99536 RNU6-486P-201ENST00000363116 107 ntBASIC1.8□□□□□ -2.12
VAT1Q99536 RNU6-853P-201ENST00000364306 107 ntBASIC1.8□□□□□ -2.12
VAT1Q99536 RNU6-621P-201ENST00000364752 109 ntBASIC1.8□□□□□ -2.12
VAT1Q99536 RNU6-658P-201ENST00000384606 106 ntBASIC1.8□□□□□ -2.12
VAT1Q99536 MIR583-201ENST00000384846 75 ntBASIC1.8□□□□□ -2.12
VAT1Q99536 CIR1P3-201ENST00000405137 479 ntBASIC1.8□□□□□ -2.12
VAT1Q99536 RN7SKP158-201ENST00000410453 326 ntBASIC1.8□□□□□ -2.12
VAT1Q99536 AC019070.1-201ENST00000415008 1024 ntBASIC1.8□□□□□ -2.12
VAT1Q99536 AL449283.1-202ENST00000418249 604 ntBASIC1.8□□□□□ -2.12
VAT1Q99536 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.8□□□□□ -2.12
VAT1Q99536 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.8□□□□□ -2.12
VAT1Q99536 GPM6BP2-201ENST00000432046 144 ntBASIC1.8□□□□□ -2.12
VAT1Q99536 AC004383.1-201ENST00000438135 289 ntBASIC1.8□□□□□ -2.12
VAT1Q99536 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.8□□□□□ -2.12
VAT1Q99536 GPM6BP1-201ENST00000446387 144 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 153 ms