Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AL355802.3-201ENST00000607571 545 ntBASIC0.4□□□□□ -2.35
SPENQ96T58 AC240442.1-201ENST00000616055 283 ntBASIC0.4□□□□□ -2.35
SPENQ96T58 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.4□□□□□ -2.35
SPENQ96T58 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC0.4□□□□□ -2.35
SPENQ96T58 MIR5087-201ENST00000635826 76 ntBASIC0.4□□□□□ -2.35
SPENQ96T58 LINC02211-204ENST00000642024 1070 ntBASIC0.4□□□□□ -2.35
SPENQ96T58 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.4□□□□□ -2.35
SPENQ96T58 AC079448.1-201ENST00000449377 373 ntBASIC0.4□□□□□ -2.35
SPENQ96T58 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
SPENQ96T58 AC008834.1-201ENST00000511612 175 ntBASIC0.4□□□□□ -2.35
SPENQ96T58 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.4□□□□□ -2.35
SPENQ96T58 AC074051.3-201ENST00000570238 358 ntBASIC0.4□□□□□ -2.35
SPENQ96T58 NUTF2P8-201ENST00000604593 363 ntBASIC0.4□□□□□ -2.35
SPENQ96T58 uc_338.14-201ENST00000613162 166 ntBASIC0.4□□□□□ -2.35
SPENQ96T58 MIR515-2-201ENST00000384883 83 ntBASIC0.4□□□□□ -2.35
SPENQ96T58 MIR515-1-201ENST00000384884 83 ntBASIC0.4□□□□□ -2.35
SPENQ96T58 RN7SKP158-201ENST00000410453 326 ntBASIC0.4□□□□□ -2.35
SPENQ96T58 RNA5SP450-201ENST00000411206 102 ntBASIC0.4□□□□□ -2.35
SPENQ96T58 AC105914.1-201ENST00000511798 226 ntBASIC0.4□□□□□ -2.35
SPENQ96T58 RNA5SP67-201ENST00000516422 131 ntBASIC0.4□□□□□ -2.35
SPENQ96T58 CYCSP2-201ENST00000558168 301 ntBASIC0.4□□□□□ -2.35
SPENQ96T58 MIR3616-201ENST00000584070 92 ntBASIC0.4□□□□□ -2.35
SPENQ96T58 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.4□□□□□ -2.35
SPENQ96T58 AC073111.2-201ENST00000605657 1075 ntBASIC0.4□□□□□ -2.35
SPENQ96T58 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC0.39□□□□□ -2.35
SPENQ96T58 PRELID3BP1-201ENST00000457142 540 ntBASIC0.39□□□□□ -2.35
SPENQ96T58 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.39□□□□□ -2.35
SPENQ96T58 AC118282.2-201ENST00000508739 374 ntBASIC0.39□□□□□ -2.35
SPENQ96T58 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC0.39□□□□□ -2.35
SPENQ96T58 AL355812.1-201ENST00000603215 216 ntBASIC0.39□□□□□ -2.35
SPENQ96T58 AC068880.5-201ENST00000624331 290 ntBASIC0.39□□□□□ -2.35
SPENQ96T58 RNU6-39P-201ENST00000384344 107 ntBASIC0.39□□□□□ -2.35
SPENQ96T58 RNU6-1072P-201ENST00000384703 107 ntBASIC0.39□□□□□ -2.35
SPENQ96T58 RNU6-443P-201ENST00000384780 107 ntBASIC0.39□□□□□ -2.35
SPENQ96T58 RNU6-920P-201ENST00000410926 92 ntBASIC0.39□□□□□ -2.35
SPENQ96T58 AC006461.1-201ENST00000412637 326 ntBASIC0.39□□□□□ -2.35
SPENQ96T58 RPL7P30-201ENST00000420888 709 ntBASIC0.39□□□□□ -2.35
SPENQ96T58 MED14P1-201ENST00000430517 648 ntBASIC0.39□□□□□ -2.35
SPENQ96T58 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.39□□□□□ -2.35
SPENQ96T58 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.39□□□□□ -2.35
SPENQ96T58 RPS27P22-201ENST00000478056 241 ntBASIC0.39□□□□□ -2.35
SPENQ96T58 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC0.39□□□□□ -2.35
SPENQ96T58 FAM60BP-201ENST00000578364 658 ntBASIC0.39□□□□□ -2.35
SPENQ96T58 AC090616.3-201ENST00000582184 217 ntBASIC0.39□□□□□ -2.35
SPENQ96T58 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC0.39□□□□□ -2.35
SPENQ96T58 AC008945.2-201ENST00000606056 604 ntBASIC0.39□□□□□ -2.35
SPENQ96T58 AC007038.2-201ENST00000608095 740 ntBASIC0.39□□□□□ -2.35
SPENQ96T58 RNA5SP368-201ENST00000364298 116 ntBASIC0.39□□□□□ -2.35
SPENQ96T58 AL356776.1-201ENST00000406574 447 ntBASIC0.39□□□□□ -2.35
SPENQ96T58 AL121578.1-201ENST00000428051 892 ntBASIC0.39□□□□□ -2.35
SPENQ96T58 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.39□□□□□ -2.35
SPENQ96T58 RNU4-57P-201ENST00000515980 135 ntBASIC0.39□□□□□ -2.35
SPENQ96T58 AC109635.4-202ENST00000531666 412 ntBASIC0.39□□□□□ -2.35
SPENQ96T58 AC073569.3-201ENST00000619055 682 ntBASIC0.39□□□□□ -2.35
SPENQ96T58 SNORA22-201ENST00000383907 134 ntBASIC0.38□□□□□ -2.35
SPENQ96T58 SNORA22C-201ENST00000384614 134 ntBASIC0.38□□□□□ -2.35
SPENQ96T58 RNU6-939P-201ENST00000384634 107 ntBASIC0.38□□□□□ -2.35
SPENQ96T58 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC0.38□□□□□ -2.35
SPENQ96T58 SNRPEP7-201ENST00000438350 220 ntBASIC0.38□□□□□ -2.35
SPENQ96T58 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
SPENQ96T58 CABYRP1-201ENST00000465493 1045 ntBASIC0.38□□□□□ -2.35
SPENQ96T58 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC0.38□□□□□ -2.35
SPENQ96T58 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC0.38□□□□□ -2.35
SPENQ96T58 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.38□□□□□ -2.35
SPENQ96T58 CENPUP2-201ENST00000555897 1186 ntBASIC0.38□□□□□ -2.35
SPENQ96T58 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.38□□□□□ -2.35
SPENQ96T58 AC100821.1-201ENST00000523153 2479 ntBASIC0.38□□□□□ -2.35
SPENQ96T58 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.38□□□□□ -2.35
SPENQ96T58 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC0.38□□□□□ -2.35
SPENQ96T58 CBX3P3-201ENST00000508108 532 ntBASIC0.38□□□□□ -2.35
SPENQ96T58 ELOCP5-201ENST00000604924 333 ntBASIC0.38□□□□□ -2.35
SPENQ96T58 AL627230.6-201ENST00000611129 280 ntBASIC0.38□□□□□ -2.35
SPENQ96T58 Y_RNA.18-201ENST00000362461 102 ntBASIC0.37□□□□□ -2.35
SPENQ96T58 SNORA25.8-201ENST00000364831 128 ntBASIC0.37□□□□□ -2.35
SPENQ96T58 RNU1-36P-201ENST00000365130 165 ntBASIC0.37□□□□□ -2.35
SPENQ96T58 AP002784.2-201ENST00000397300 549 ntBASIC0.37□□□□□ -2.35
SPENQ96T58 MIR1468-201ENST00000410600 86 ntBASIC0.37□□□□□ -2.35
SPENQ96T58 RPL23AP95-201ENST00000426806 265 ntBASIC0.37□□□□□ -2.35
SPENQ96T58 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC0.37□□□□□ -2.35
SPENQ96T58 AC112518.2-201ENST00000508565 425 ntBASIC0.37□□□□□ -2.35
SPENQ96T58 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC0.37□□□□□ -2.35
SPENQ96T58 RNU6-1187P-201ENST00000364771 110 ntBASIC0.37□□□□□ -2.35
SPENQ96T58 AL353706.1-201ENST00000436728 494 ntBASIC0.37□□□□□ -2.35
SPENQ96T58 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC0.37□□□□□ -2.35
SPENQ96T58 RNF2P1-201ENST00000442955 1010 ntBASIC0.37□□□□□ -2.35
SPENQ96T58 TPTE2P6-202ENST00000445572 1007 ntBASIC0.37□□□□□ -2.35
SPENQ96T58 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
SPENQ96T58 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
SPENQ96T58 SNORA9.1-201ENST00000362412 131 ntBASIC0.37□□□□□ -2.35
SPENQ96T58 SNORA16B-201ENST00000364674 135 ntBASIC0.37□□□□□ -2.35
SPENQ96T58 RNU6-72P-201ENST00000384285 79 ntBASIC0.37□□□□□ -2.35
SPENQ96T58 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.37□□□□□ -2.35
SPENQ96T58 MTND4LP13-201ENST00000425022 298 ntBASIC0.37□□□□□ -2.35
SPENQ96T58 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.37□□□□□ -2.35
SPENQ96T58 COL6A4P2-205ENST00000509855 506 ntBASIC0.37□□□□□ -2.35
SPENQ96T58 RNU6-347P-201ENST00000516658 105 ntBASIC0.37□□□□□ -2.35
SPENQ96T58 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC0.37□□□□□ -2.35
SPENQ96T58 MIR4493-201ENST00000584016 73 ntBASIC0.37□□□□□ -2.35
SPENQ96T58 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.37□□□□□ -2.35
SPENQ96T58 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms