Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.32□□□□□ -2.04
RPRD1AQ96P16 MIR6873-201ENST00000622788 63 ntBASIC2.32□□□□□ -2.04
RPRD1AQ96P16 AC103706.2-201ENST00000638080 240 ntBASIC2.32□□□□□ -2.04
RPRD1AQ96P16 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RPRD1AQ96P16 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.31□□□□□ -2.04
RPRD1AQ96P16 MTND5P6-201ENST00000422338 1798 ntBASIC2.31□□□□□ -2.04
RPRD1AQ96P16 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
RPRD1AQ96P16 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RPRD1AQ96P16 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.31□□□□□ -2.04
RPRD1AQ96P16 RNU6-1284P-201ENST00000363701 100 ntBASIC2.31□□□□□ -2.04
RPRD1AQ96P16 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.31□□□□□ -2.04
RPRD1AQ96P16 AL591416.1-201ENST00000404015 867 ntBASIC2.31□□□□□ -2.04
RPRD1AQ96P16 AL021407.1-201ENST00000404531 386 ntBASIC2.31□□□□□ -2.04
RPRD1AQ96P16 NDUFS5P1-201ENST00000405668 289 ntBASIC2.31□□□□□ -2.04
RPRD1AQ96P16 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.31□□□□□ -2.04
RPRD1AQ96P16 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.31□□□□□ -2.04
RPRD1AQ96P16 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.31□□□□□ -2.04
RPRD1AQ96P16 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.31□□□□□ -2.04
RPRD1AQ96P16 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.31□□□□□ -2.04
RPRD1AQ96P16 AC104651.1-201ENST00000427559 735 ntBASIC2.31□□□□□ -2.04
RPRD1AQ96P16 UBE2D3P1-201ENST00000436669 444 ntBASIC2.31□□□□□ -2.04
RPRD1AQ96P16 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.31□□□□□ -2.04
RPRD1AQ96P16 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.31□□□□□ -2.04
RPRD1AQ96P16 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.31□□□□□ -2.04
RPRD1AQ96P16 DUXAP8-207ENST00000456786 622 ntBASIC2.31□□□□□ -2.04
RPRD1AQ96P16 AC139453.3-201ENST00000493276 369 ntBASIC2.31□□□□□ -2.04
RPRD1AQ96P16 AC023141.11-201ENST00000508864 202 ntBASIC2.31□□□□□ -2.04
RPRD1AQ96P16 AC006199.1-201ENST00000548728 219 ntBASIC2.31□□□□□ -2.04
RPRD1AQ96P16 MIR3199-1-201ENST00000582434 88 ntBASIC2.31□□□□□ -2.04
RPRD1AQ96P16 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.31□□□□□ -2.04
RPRD1AQ96P16 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.31□□□□□ -2.04
RPRD1AQ96P16 AC013412.1-201ENST00000610687 192 ntBASIC2.31□□□□□ -2.04
RPRD1AQ96P16 AC092106.3-201ENST00000611308 722 ntBASIC2.31□□□□□ -2.04
RPRD1AQ96P16 AC007490.1-201ENST00000624321 703 ntBASIC2.31□□□□□ -2.04
RPRD1AQ96P16 AC091965.5-201ENST00000624785 342 ntBASIC2.31□□□□□ -2.04
RPRD1AQ96P16 AC006927.4-201ENST00000639187 543 ntBASIC2.31□□□□□ -2.04
RPRD1AQ96P16 MTND4P16-201ENST00000466108 1367 ntBASIC2.31□□□□□ -2.04
RPRD1AQ96P16 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.3□□□□□ -2.04
RPRD1AQ96P16 FAM133CP-201ENST00000332869 704 ntBASIC2.3□□□□□ -2.04
RPRD1AQ96P16 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
RPRD1AQ96P16 RNU6-658P-201ENST00000384606 106 ntBASIC2.3□□□□□ -2.04
RPRD1AQ96P16 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
RPRD1AQ96P16 RNA5SP425-201ENST00000410336 112 ntBASIC2.3□□□□□ -2.04
RPRD1AQ96P16 ZNF90P2-204ENST00000419323 1075 ntBASIC2.3□□□□□ -2.04
RPRD1AQ96P16 AL031659.1-201ENST00000447075 539 ntBASIC2.3□□□□□ -2.04
RPRD1AQ96P16 AL353705.4-201ENST00000449661 238 ntBASIC2.3□□□□□ -2.04
RPRD1AQ96P16 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.3□□□□□ -2.04
RPRD1AQ96P16 ANKRD26P4-201ENST00000455755 950 ntBASIC2.3□□□□□ -2.04
RPRD1AQ96P16 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.3□□□□□ -2.04
RPRD1AQ96P16 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.3□□□□□ -2.04
RPRD1AQ96P16 RPL37P6-201ENST00000460682 294 ntBASIC2.3□□□□□ -2.04
RPRD1AQ96P16 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.3□□□□□ -2.04
RPRD1AQ96P16 RNU6-703P-201ENST00000516946 107 ntBASIC2.3□□□□□ -2.04
RPRD1AQ96P16 AP006587.4-201ENST00000526053 529 ntBASIC2.3□□□□□ -2.04
RPRD1AQ96P16 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.3□□□□□ -2.04
RPRD1AQ96P16 AC073544.2-201ENST00000601155 540 ntBASIC2.3□□□□□ -2.04
RPRD1AQ96P16 AC013244.3-201ENST00000605614 388 ntBASIC2.3□□□□□ -2.04
RPRD1AQ96P16 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.3□□□□□ -2.04
RPRD1AQ96P16 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.3□□□□□ -2.04
RPRD1AQ96P16 AL160394.1-201ENST00000624765 724 ntBASIC2.3□□□□□ -2.04
RPRD1AQ96P16 ADAM3A-203ENST00000461344 2157 ntBASIC2.29□□□□□ -2.04
RPRD1AQ96P16 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.29□□□□□ -2.04
RPRD1AQ96P16 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
RPRD1AQ96P16 RNU6-14P-201ENST00000384630 106 ntBASIC2.29□□□□□ -2.04
RPRD1AQ96P16 MIR218-1-201ENST00000384999 110 ntBASIC2.29□□□□□ -2.04
RPRD1AQ96P16 HMGB1P11-201ENST00000413899 637 ntBASIC2.29□□□□□ -2.04
RPRD1AQ96P16 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.29□□□□□ -2.04
RPRD1AQ96P16 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.29□□□□□ -2.04
RPRD1AQ96P16 MICF-203ENST00000432679 129 ntBASIC2.29□□□□□ -2.04
RPRD1AQ96P16 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.29□□□□□ -2.04
RPRD1AQ96P16 TIMM9P1-201ENST00000436122 256 ntBASIC2.29□□□□□ -2.04
RPRD1AQ96P16 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.29□□□□□ -2.04
RPRD1AQ96P16 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.29□□□□□ -2.04
RPRD1AQ96P16 MTATP6P7-201ENST00000453315 681 ntBASIC2.29□□□□□ -2.04
RPRD1AQ96P16 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.29□□□□□ -2.04
RPRD1AQ96P16 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.29□□□□□ -2.04
RPRD1AQ96P16 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.29□□□□□ -2.04
RPRD1AQ96P16 AC108059.3-201ENST00000456388 214 ntBASIC2.29□□□□□ -2.04
RPRD1AQ96P16 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.29□□□□□ -2.04
RPRD1AQ96P16 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
RPRD1AQ96P16 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.29□□□□□ -2.04
RPRD1AQ96P16 MRPS36P5-201ENST00000551909 298 ntBASIC2.29□□□□□ -2.04
RPRD1AQ96P16 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.29□□□□□ -2.04
RPRD1AQ96P16 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.29□□□□□ -2.04
RPRD1AQ96P16 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.29□□□□□ -2.04
RPRD1AQ96P16 AL355598.1-201ENST00000604169 202 ntBASIC2.29□□□□□ -2.04
RPRD1AQ96P16 AC091152.3-201ENST00000604227 325 ntBASIC2.29□□□□□ -2.04
RPRD1AQ96P16 AC107294.1-201ENST00000609524 467 ntBASIC2.29□□□□□ -2.04
RPRD1AQ96P16 MIR6132-201ENST00000622083 109 ntBASIC2.29□□□□□ -2.04
RPRD1AQ96P16 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.29□□□□□ -2.04
RPRD1AQ96P16 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RPRD1AQ96P16 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.28□□□□□ -2.04
RPRD1AQ96P16 NACAP2-201ENST00000318548 624 ntBASIC2.28□□□□□ -2.04
RPRD1AQ96P16 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.28□□□□□ -2.04
RPRD1AQ96P16 AL596028.1-201ENST00000326971 197 ntBASIC2.28□□□□□ -2.04
RPRD1AQ96P16 RNU6-701P-201ENST00000384059 107 ntBASIC2.28□□□□□ -2.04
RPRD1AQ96P16 RNU6-278P-201ENST00000390945 109 ntBASIC2.28□□□□□ -2.04
RPRD1AQ96P16 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.28□□□□□ -2.04
RPRD1AQ96P16 SSR1P2-201ENST00000415208 787 ntBASIC2.28□□□□□ -2.04
RPRD1AQ96P16 AL139415.2-201ENST00000431968 163 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms