Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC138Q96M89 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CCDC138Q96M89 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC138Q96M89 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC138Q96M89 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC138Q96M89 RNU6-45P-201ENST00000384471 107 ntBASIC3.56□□□□□ -1.84
CCDC138Q96M89 RNU6-393P-201ENST00000384475 107 ntBASIC3.56□□□□□ -1.84
CCDC138Q96M89 RNU6-1127P-201ENST00000384580 107 ntBASIC3.56□□□□□ -1.84
CCDC138Q96M89 SNORA48.8-201ENST00000391324 134 ntBASIC3.56□□□□□ -1.84
CCDC138Q96M89 AL445189.1-201ENST00000405722 338 ntBASIC3.56□□□□□ -1.84
CCDC138Q96M89 SNORA11.1-201ENST00000408133 129 ntBASIC3.56□□□□□ -1.84
CCDC138Q96M89 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC138Q96M89 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC138Q96M89 AC006989.1-201ENST00000427212 131 ntBASIC3.56□□□□□ -1.84
CCDC138Q96M89 ATP5JP1-201ENST00000431631 322 ntBASIC3.56□□□□□ -1.84
CCDC138Q96M89 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC138Q96M89 NOTCH2P1-201ENST00000443481 624 ntBASIC3.56□□□□□ -1.84
CCDC138Q96M89 AL078601.1-201ENST00000444542 271 ntBASIC3.56□□□□□ -1.84
CCDC138Q96M89 AL360271.2-201ENST00000447710 161 ntBASIC3.56□□□□□ -1.84
CCDC138Q96M89 HMGB1P30-201ENST00000492455 606 ntBASIC3.56□□□□□ -1.84
CCDC138Q96M89 RNU4-29P-201ENST00000515943 174 ntBASIC3.56□□□□□ -1.84
CCDC138Q96M89 SNORD60.2-201ENST00000516883 86 ntBASIC3.56□□□□□ -1.84
CCDC138Q96M89 RNU6-1183P-201ENST00000517054 60 ntBASIC3.56□□□□□ -1.84
CCDC138Q96M89 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.56□□□□□ -1.84
CCDC138Q96M89 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC138Q96M89 TRAV37-201ENST00000553906 342 ntBASIC3.56□□□□□ -1.84
CCDC138Q96M89 DISC2.1-201ENST00000612827 205 ntBASIC3.56□□□□□ -1.84
CCDC138Q96M89 uc_338.34-201ENST00000617467 174 ntBASIC3.56□□□□□ -1.84
CCDC138Q96M89 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.56□□□□□ -1.84
CCDC138Q96M89 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC138Q96M89 AC119674.1-207ENST00000641355 633 ntBASIC3.56□□□□□ -1.84
CCDC138Q96M89 AC110491.1-201ENST00000562191 2010 ntBASIC3.56□□□□□ -1.84
CCDC138Q96M89 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC138Q96M89 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.55□□□□□ -1.84
CCDC138Q96M89 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC138Q96M89 ASNSP3-201ENST00000451989 1306 ntBASIC3.55□□□□□ -1.84
CCDC138Q96M89 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CCDC138Q96M89 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
CCDC138Q96M89 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC138Q96M89 SNORA75B-201ENST00000384053 137 ntBASIC3.55□□□□□ -1.84
CCDC138Q96M89 RNU6-434P-201ENST00000384376 107 ntBASIC3.55□□□□□ -1.84
CCDC138Q96M89 SNORD70.1-201ENST00000391007 85 ntBASIC3.55□□□□□ -1.84
CCDC138Q96M89 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC138Q96M89 AL356057.2-201ENST00000403318 432 ntBASIC3.55□□□□□ -1.84
CCDC138Q96M89 RPL5P18-201ENST00000406671 891 ntBASIC3.55□□□□□ -1.84
CCDC138Q96M89 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC138Q96M89 RNU6-193P-201ENST00000410977 107 ntBASIC3.55□□□□□ -1.84
CCDC138Q96M89 RAB9AP3-201ENST00000412737 573 ntBASIC3.55□□□□□ -1.84
CCDC138Q96M89 AL365496.1-201ENST00000426885 215 ntBASIC3.55□□□□□ -1.84
CCDC138Q96M89 AL669831.1-202ENST00000428504 417 ntBASIC3.55□□□□□ -1.84
CCDC138Q96M89 AL158071.1-201ENST00000430315 461 ntBASIC3.55□□□□□ -1.84
CCDC138Q96M89 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC138Q96M89 AC073063.1-201ENST00000434352 607 ntBASIC3.55□□□□□ -1.84
CCDC138Q96M89 GTF2IP13-201ENST00000438487 386 ntBASIC3.55□□□□□ -1.84
CCDC138Q96M89 MTATP6P13-201ENST00000438531 667 ntBASIC3.55□□□□□ -1.84
CCDC138Q96M89 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC138Q96M89 RAB9AP1-201ENST00000449393 573 ntBASIC3.55□□□□□ -1.84
CCDC138Q96M89 NDUFB1P2-201ENST00000449477 176 ntBASIC3.55□□□□□ -1.84
CCDC138Q96M89 RPS4XP22-201ENST00000480755 780 ntBASIC3.55□□□□□ -1.84
CCDC138Q96M89 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC138Q96M89 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC138Q96M89 MTCO3P9-201ENST00000506989 781 ntBASIC3.55□□□□□ -1.84
CCDC138Q96M89 HMGN1P11-201ENST00000508668 303 ntBASIC3.55□□□□□ -1.84
CCDC138Q96M89 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC138Q96M89 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC138Q96M89 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC138Q96M89 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC138Q96M89 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.55□□□□□ -1.84
CCDC138Q96M89 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC138Q96M89 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC138Q96M89 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC138Q96M89 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC138Q96M89 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.55□□□□□ -1.84
CCDC138Q96M89 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC138Q96M89 AL138976.2-201ENST00000563989 694 ntBASIC3.55□□□□□ -1.84
CCDC138Q96M89 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC138Q96M89 MIR4738-201ENST00000579134 87 ntBASIC3.55□□□□□ -1.84
CCDC138Q96M89 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.55□□□□□ -1.84
CCDC138Q96M89 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC138Q96M89 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC138Q96M89 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC138Q96M89 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC138Q96M89 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC138Q96M89 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.55□□□□□ -1.84
CCDC138Q96M89 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC138Q96M89 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC138Q96M89 AC091564.4-201ENST00000533934 2194 ntBASIC3.54□□□□□ -1.84
CCDC138Q96M89 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC138Q96M89 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC138Q96M89 Y_RNA.38-201ENST00000362617 102 ntBASIC3.54□□□□□ -1.84
CCDC138Q96M89 CD24P4-201ENST00000382840 243 ntBASIC3.54□□□□□ -1.84
CCDC138Q96M89 RNU6-1068P-201ENST00000410958 103 ntBASIC3.54□□□□□ -1.84
CCDC138Q96M89 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC138Q96M89 GOT2P5-201ENST00000433995 546 ntBASIC3.54□□□□□ -1.84
CCDC138Q96M89 AC098831.1-201ENST00000440661 216 ntBASIC3.54□□□□□ -1.84
CCDC138Q96M89 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC138Q96M89 RPS15AP27-201ENST00000449183 343 ntBASIC3.54□□□□□ -1.84
CCDC138Q96M89 AL583843.1-201ENST00000456070 346 ntBASIC3.54□□□□□ -1.84
CCDC138Q96M89 SNORA84-201ENST00000459229 133 ntBASIC3.54□□□□□ -1.84
CCDC138Q96M89 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms