Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.05□□□□□ -2.08
C9orf72Q96LT7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.05□□□□□ -2.08
C9orf72Q96LT7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
C9orf72Q96LT7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
C9orf72Q96LT7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
C9orf72Q96LT7 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
C9orf72Q96LT7 RNU6-658P-201ENST00000384606 106 ntBASIC2.04□□□□□ -2.08
C9orf72Q96LT7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
C9orf72Q96LT7 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
C9orf72Q96LT7 MIR1289-2-201ENST00000408360 111 ntBASIC2.04□□□□□ -2.08
C9orf72Q96LT7 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.04□□□□□ -2.08
C9orf72Q96LT7 GPM6BP2-201ENST00000432046 144 ntBASIC2.04□□□□□ -2.08
C9orf72Q96LT7 RPL36AP53-201ENST00000432891 316 ntBASIC2.04□□□□□ -2.08
C9orf72Q96LT7 UBE2FP3-201ENST00000436366 524 ntBASIC2.04□□□□□ -2.08
C9orf72Q96LT7 AL161651.1-201ENST00000440882 223 ntBASIC2.04□□□□□ -2.08
C9orf72Q96LT7 GPM6BP1-201ENST00000446387 144 ntBASIC2.04□□□□□ -2.08
C9orf72Q96LT7 HMGN2P10-201ENST00000448085 265 ntBASIC2.04□□□□□ -2.08
C9orf72Q96LT7 MTND5P30-201ENST00000452896 1731 ntBASIC2.04□□□□□ -2.08
C9orf72Q96LT7 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.04□□□□□ -2.08
C9orf72Q96LT7 AC034222.1-201ENST00000494052 532 ntBASIC2.04□□□□□ -2.08
C9orf72Q96LT7 AC096571.1-202ENST00000506634 735 ntBASIC2.04□□□□□ -2.08
C9orf72Q96LT7 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.04□□□□□ -2.08
C9orf72Q96LT7 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.04□□□□□ -2.08
C9orf72Q96LT7 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.04□□□□□ -2.08
C9orf72Q96LT7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.04□□□□□ -2.08
C9orf72Q96LT7 CYCSP26-201ENST00000534107 320 ntBASIC2.04□□□□□ -2.08
C9orf72Q96LT7 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.04□□□□□ -2.08
C9orf72Q96LT7 AC006199.1-201ENST00000548728 219 ntBASIC2.04□□□□□ -2.08
C9orf72Q96LT7 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.04□□□□□ -2.08
C9orf72Q96LT7 MIR5089-201ENST00000580047 84 ntBASIC2.04□□□□□ -2.08
C9orf72Q96LT7 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.04□□□□□ -2.08
C9orf72Q96LT7 MIR4448-201ENST00000584360 86 ntBASIC2.04□□□□□ -2.08
C9orf72Q96LT7 SNRPGP19-201ENST00000603826 189 ntBASIC2.04□□□□□ -2.08
C9orf72Q96LT7 APOOP1-201ENST00000604695 592 ntBASIC2.04□□□□□ -2.08
C9orf72Q96LT7 Y_RNA.783-201ENST00000613546 102 ntBASIC2.04□□□□□ -2.08
C9orf72Q96LT7 AL161423.1-201ENST00000613700 262 ntBASIC2.04□□□□□ -2.08
C9orf72Q96LT7 AP000676.3-201ENST00000623299 569 ntBASIC2.04□□□□□ -2.08
C9orf72Q96LT7 AL356266.1-201ENST00000623311 483 ntBASIC2.04□□□□□ -2.08
C9orf72Q96LT7 AL138960.2-201ENST00000625145 535 ntBASIC2.04□□□□□ -2.08
C9orf72Q96LT7 PISRT1-201ENST00000626175 531 ntBASIC2.04□□□□□ -2.08
C9orf72Q96LT7 AC097655.1-201ENST00000635075 318 ntBASIC2.04□□□□□ -2.08
C9orf72Q96LT7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
C9orf72Q96LT7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
C9orf72Q96LT7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
C9orf72Q96LT7 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
C9orf72Q96LT7 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
C9orf72Q96LT7 RNU6-512P-201ENST00000364438 103 ntBASIC2.03□□□□□ -2.08
C9orf72Q96LT7 RNA5SP88-201ENST00000365560 109 ntBASIC2.03□□□□□ -2.08
C9orf72Q96LT7 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
C9orf72Q96LT7 AL139397.2-201ENST00000404529 772 ntBASIC2.03□□□□□ -2.08
C9orf72Q96LT7 GSTA9P-201ENST00000406231 611 ntBASIC2.03□□□□□ -2.08
C9orf72Q96LT7 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.03□□□□□ -2.08
C9orf72Q96LT7 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.03□□□□□ -2.08
C9orf72Q96LT7 MTCO1P27-201ENST00000448269 226 ntBASIC2.03□□□□□ -2.08
C9orf72Q96LT7 PSPHP1-201ENST00000450062 261 ntBASIC2.03□□□□□ -2.08
C9orf72Q96LT7 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.03□□□□□ -2.08
C9orf72Q96LT7 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.03□□□□□ -2.08
C9orf72Q96LT7 AC080013.2-201ENST00000460866 323 ntBASIC2.03□□□□□ -2.08
C9orf72Q96LT7 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.03□□□□□ -2.08
C9orf72Q96LT7 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
C9orf72Q96LT7 AC021146.8-201ENST00000507455 733 ntBASIC2.03□□□□□ -2.08
C9orf72Q96LT7 AC116353.3-201ENST00000511215 249 ntBASIC2.03□□□□□ -2.08
C9orf72Q96LT7 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.03□□□□□ -2.08
C9orf72Q96LT7 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.03□□□□□ -2.08
C9orf72Q96LT7 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.03□□□□□ -2.08
C9orf72Q96LT7 MIR892C-201ENST00000516410 77 ntBASIC2.03□□□□□ -2.08
C9orf72Q96LT7 SNORD19.2-201ENST00000516978 73 ntBASIC2.03□□□□□ -2.08
C9orf72Q96LT7 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.03□□□□□ -2.08
C9orf72Q96LT7 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.03□□□□□ -2.08
C9orf72Q96LT7 AC009712.1-201ENST00000564938 316 ntBASIC2.03□□□□□ -2.08
C9orf72Q96LT7 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.03□□□□□ -2.08
C9orf72Q96LT7 AC091152.3-201ENST00000604227 325 ntBASIC2.03□□□□□ -2.08
C9orf72Q96LT7 AC004908.2-201ENST00000609090 574 ntBASIC2.03□□□□□ -2.08
C9orf72Q96LT7 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.03□□□□□ -2.08
C9orf72Q96LT7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.03□□□□□ -2.08
C9orf72Q96LT7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
C9orf72Q96LT7 MIR147B-201ENST00000390185 80 ntBASIC2.02□□□□□ -2.09
C9orf72Q96LT7 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.02□□□□□ -2.09
C9orf72Q96LT7 ERHP2-201ENST00000402323 299 ntBASIC2.02□□□□□ -2.09
C9orf72Q96LT7 AL136310.1-201ENST00000404926 654 ntBASIC2.02□□□□□ -2.09
C9orf72Q96LT7 AL359704.1-201ENST00000411586 781 ntBASIC2.02□□□□□ -2.09
C9orf72Q96LT7 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.02□□□□□ -2.09
C9orf72Q96LT7 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.02□□□□□ -2.09
C9orf72Q96LT7 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.02□□□□□ -2.09
C9orf72Q96LT7 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.02□□□□□ -2.09
C9orf72Q96LT7 AL445646.1-201ENST00000431784 216 ntBASIC2.02□□□□□ -2.09
C9orf72Q96LT7 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.02□□□□□ -2.09
C9orf72Q96LT7 USP9YP10-201ENST00000454868 628 ntBASIC2.02□□□□□ -2.09
C9orf72Q96LT7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.02□□□□□ -2.09
C9orf72Q96LT7 AC005410.1-202ENST00000460347 485 ntBASIC2.02□□□□□ -2.09
C9orf72Q96LT7 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.02□□□□□ -2.09
C9orf72Q96LT7 AC068587.2-201ENST00000478386 781 ntBASIC2.02□□□□□ -2.09
C9orf72Q96LT7 RPL21P99-201ENST00000480369 423 ntBASIC2.02□□□□□ -2.09
C9orf72Q96LT7 AC068781.1-201ENST00000488231 618 ntBASIC2.02□□□□□ -2.09
C9orf72Q96LT7 AC106872.3-201ENST00000495104 446 ntBASIC2.02□□□□□ -2.09
C9orf72Q96LT7 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.02□□□□□ -2.09
C9orf72Q96LT7 RNU7-193P-201ENST00000516723 65 ntBASIC2.02□□□□□ -2.09
C9orf72Q96LT7 RN7SKP258-201ENST00000517151 304 ntBASIC2.02□□□□□ -2.09
C9orf72Q96LT7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.02□□□□□ -2.09
C9orf72Q96LT7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms