Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 Y_RNA.28-201ENST00000362554 111 ntBASIC4.4□□□□□ -1.71
CHAMP1Q96JM3 RNU6-288P-201ENST00000363690 104 ntBASIC4.4□□□□□ -1.71
CHAMP1Q96JM3 Y_RNA.646-201ENST00000410980 101 ntBASIC4.4□□□□□ -1.71
CHAMP1Q96JM3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.4□□□□□ -1.71
CHAMP1Q96JM3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.4□□□□□ -1.71
CHAMP1Q96JM3 AL590632.1-201ENST00000424289 371 ntBASIC4.4□□□□□ -1.71
CHAMP1Q96JM3 MTND3P2-201ENST00000438452 342 ntBASIC4.4□□□□□ -1.71
CHAMP1Q96JM3 AL121871.1-201ENST00000443413 436 ntBASIC4.4□□□□□ -1.71
CHAMP1Q96JM3 RPL21P23-201ENST00000446654 460 ntBASIC4.4□□□□□ -1.71
CHAMP1Q96JM3 RPL30P15-201ENST00000457129 321 ntBASIC4.4□□□□□ -1.71
CHAMP1Q96JM3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.4□□□□□ -1.71
CHAMP1Q96JM3 AC104472.2-201ENST00000469035 601 ntBASIC4.4□□□□□ -1.71
CHAMP1Q96JM3 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CHAMP1Q96JM3 RNU6-1046P-201ENST00000516538 107 ntBASIC4.4□□□□□ -1.71
CHAMP1Q96JM3 SCARNA14-201ENST00000516903 136 ntBASIC4.4□□□□□ -1.71
CHAMP1Q96JM3 RNU6-1213P-201ENST00000517075 94 ntBASIC4.4□□□□□ -1.71
CHAMP1Q96JM3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.4□□□□□ -1.71
CHAMP1Q96JM3 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.4□□□□□ -1.71
CHAMP1Q96JM3 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.4□□□□□ -1.71
CHAMP1Q96JM3 AC008011.1-201ENST00000545989 227 ntBASIC4.4□□□□□ -1.71
CHAMP1Q96JM3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.4□□□□□ -1.71
CHAMP1Q96JM3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.4□□□□□ -1.71
CHAMP1Q96JM3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.4□□□□□ -1.71
CHAMP1Q96JM3 AL157817.1-201ENST00000614264 790 ntBASIC4.4□□□□□ -1.71
CHAMP1Q96JM3 AL391261.4-201ENST00000616012 481 ntBASIC4.4□□□□□ -1.71
CHAMP1Q96JM3 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CHAMP1Q96JM3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
CHAMP1Q96JM3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.39□□□□□ -1.71
CHAMP1Q96JM3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CHAMP1Q96JM3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.39□□□□□ -1.71
CHAMP1Q96JM3 Y_RNA.5-201ENST00000362334 102 ntBASIC4.39□□□□□ -1.71
CHAMP1Q96JM3 RNA5SP119-201ENST00000362715 117 ntBASIC4.39□□□□□ -1.71
CHAMP1Q96JM3 RNU6-593P-201ENST00000364716 112 ntBASIC4.39□□□□□ -1.71
CHAMP1Q96JM3 RNU6-128P-201ENST00000383976 107 ntBASIC4.39□□□□□ -1.71
CHAMP1Q96JM3 AL356095.1-201ENST00000417217 199 ntBASIC4.39□□□□□ -1.71
CHAMP1Q96JM3 RPS12P23-201ENST00000419579 400 ntBASIC4.39□□□□□ -1.71
CHAMP1Q96JM3 MTCO1P39-201ENST00000426148 480 ntBASIC4.39□□□□□ -1.71
CHAMP1Q96JM3 AL691449.1-201ENST00000426570 421 ntBASIC4.39□□□□□ -1.71
CHAMP1Q96JM3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.39□□□□□ -1.71
CHAMP1Q96JM3 AL445584.1-201ENST00000431451 330 ntBASIC4.39□□□□□ -1.71
CHAMP1Q96JM3 AC008264.1-201ENST00000447612 367 ntBASIC4.39□□□□□ -1.71
CHAMP1Q96JM3 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.39□□□□□ -1.71
CHAMP1Q96JM3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.39□□□□□ -1.71
CHAMP1Q96JM3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.39□□□□□ -1.71
CHAMP1Q96JM3 CYCSP27-201ENST00000527643 293 ntBASIC4.39□□□□□ -1.71
CHAMP1Q96JM3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CHAMP1Q96JM3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CHAMP1Q96JM3 MIR15A-201ENST00000607334 83 ntBASIC4.39□□□□□ -1.71
CHAMP1Q96JM3 AL669831.3-213ENST00000636676 183 ntBASIC4.39□□□□□ -1.71
CHAMP1Q96JM3 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CHAMP1Q96JM3 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.39□□□□□ -1.71
CHAMP1Q96JM3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHAMP1Q96JM3 KPNA2P1-201ENST00000458289 1591 ntBASIC4.39□□□□□ -1.71
CHAMP1Q96JM3 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.39□□□□□ -1.71
CHAMP1Q96JM3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHAMP1Q96JM3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.39□□□□□ -1.71
CHAMP1Q96JM3 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CHAMP1Q96JM3 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 DDX18P3-201ENST00000404856 2007 ntBASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 RNU6-1115P-201ENST00000362490 106 ntBASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 RNU6-328P-201ENST00000390887 106 ntBASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 RPS4XP7-201ENST00000406274 780 ntBASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 RPS12P24-201ENST00000412619 387 ntBASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 AC113618.1-201ENST00000416747 285 ntBASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 AC079780.1-201ENST00000428259 207 ntBASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 AL591212.2-201ENST00000433923 257 ntBASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 RPS29P31-201ENST00000446147 164 ntBASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 AC110792.1-201ENST00000491826 472 ntBASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 RNU6-1332P-201ENST00000516666 104 ntBASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 RNU6-1137P-201ENST00000517073 99 ntBASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 ERHP1-201ENST00000523006 310 ntBASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 AC091516.1-201ENST00000549191 703 ntBASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 AC012119.1-201ENST00000603184 222 ntBASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 AL137849.1-201ENST00000604767 169 ntBASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 AC010378.1-201ENST00000619270 362 ntBASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 AC012442.3-202ENST00000636742 206 ntBASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 AC007656.2-201ENST00000624902 4547 ntBASIC4.38□□□□□ -1.71
CHAMP1Q96JM3 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 AC004944.1-201ENST00000517807 3059 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms