Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AL359273.1-201ENST00000510918 627 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 RNA5SP208-201ENST00000516156 78 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 RNU1-95P-201ENST00000516357 160 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 RNU1-128P-201ENST00000516704 160 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 AC026403.1-201ENST00000518938 295 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 AC011602.1-201ENST00000546484 331 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.56□□□□□ -1.84
VPS50Q96JG6 SCOCP1-201ENST00000554676 349 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.56□□□□□ -1.84
VPS50Q96JG6 AC019176.2-201ENST00000611579 315 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 AC034102.8-201ENST00000615146 484 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 AL359547.2-201ENST00000615810 418 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 AC084757.4-201ENST00000616350 526 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.56□□□□□ -1.84
VPS50Q96JG6 AC039056.2-201ENST00000622261 511 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 AL034408.1-202ENST00000636088 415 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VPS50Q96JG6 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.56□□□□□ -1.84
VPS50Q96JG6 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.56□□□□□ -1.84
VPS50Q96JG6 SRP72P2-201ENST00000344851 1979 ntBASIC3.56□□□□□ -1.84
VPS50Q96JG6 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.56□□□□□ -1.84
VPS50Q96JG6 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS50Q96JG6 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
VPS50Q96JG6 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
VPS50Q96JG6 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
VPS50Q96JG6 AC110774.1-201ENST00000623567 2018 ntBASIC3.55□□□□□ -1.84
VPS50Q96JG6 Y_RNA.142-201ENST00000363491 102 ntBASIC3.55□□□□□ -1.84
VPS50Q96JG6 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS50Q96JG6 Z85995.1-201ENST00000415547 335 ntBASIC3.55□□□□□ -1.84
VPS50Q96JG6 BX842559.1-201ENST00000419615 532 ntBASIC3.55□□□□□ -1.84
VPS50Q96JG6 RPS3AP46-201ENST00000448352 682 ntBASIC3.55□□□□□ -1.84
VPS50Q96JG6 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS50Q96JG6 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.55□□□□□ -1.84
VPS50Q96JG6 RNU6-953P-201ENST00000459154 107 ntBASIC3.55□□□□□ -1.84
VPS50Q96JG6 AC007547.1-201ENST00000462177 490 ntBASIC3.55□□□□□ -1.84
VPS50Q96JG6 AC010401.1-201ENST00000463867 348 ntBASIC3.55□□□□□ -1.84
VPS50Q96JG6 RPS23P3-201ENST00000470993 430 ntBASIC3.55□□□□□ -1.84
VPS50Q96JG6 AC091885.1-201ENST00000506658 268 ntBASIC3.55□□□□□ -1.84
VPS50Q96JG6 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS50Q96JG6 RNU4-49P-201ENST00000516080 140 ntBASIC3.55□□□□□ -1.84
VPS50Q96JG6 SCARNA15.2-201ENST00000516409 127 ntBASIC3.55□□□□□ -1.84
VPS50Q96JG6 NDUFB9P3-201ENST00000521269 501 ntBASIC3.55□□□□□ -1.84
VPS50Q96JG6 AC022695.1-201ENST00000522089 237 ntBASIC3.55□□□□□ -1.84
VPS50Q96JG6 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS50Q96JG6 PSMA3P-201ENST00000555485 635 ntBASIC3.55□□□□□ -1.84
VPS50Q96JG6 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS50Q96JG6 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS50Q96JG6 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS50Q96JG6 MIR4444-1-201ENST00000581696 74 ntBASIC3.55□□□□□ -1.84
VPS50Q96JG6 MIR4444-2-201ENST00000584390 74 ntBASIC3.55□□□□□ -1.84
VPS50Q96JG6 AC002545.1-201ENST00000592511 181 ntBASIC3.55□□□□□ -1.84
VPS50Q96JG6 KLKP1-201ENST00000595979 403 ntBASIC3.55□□□□□ -1.84
VPS50Q96JG6 AL138889.2-201ENST00000603883 242 ntBASIC3.55□□□□□ -1.84
VPS50Q96JG6 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS50Q96JG6 MIR7851-201ENST00000610611 160 ntBASIC3.55□□□□□ -1.84
VPS50Q96JG6 AL121772.2-201ENST00000614331 297 ntBASIC3.55□□□□□ -1.84
VPS50Q96JG6 AC022140.2-201ENST00000623500 188 ntBASIC3.55□□□□□ -1.84
VPS50Q96JG6 AP003400.5-201ENST00000624827 617 ntBASIC3.55□□□□□ -1.84
VPS50Q96JG6 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.55□□□□□ -1.84
VPS50Q96JG6 AC099654.5-201ENST00000636479 350 ntBASIC3.55□□□□□ -1.84
VPS50Q96JG6 AC112487.2-201ENST00000637950 304 ntBASIC3.55□□□□□ -1.84
VPS50Q96JG6 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
VPS50Q96JG6 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
VPS50Q96JG6 MTND5P27-201ENST00000428871 1720 ntBASIC3.55□□□□□ -1.84
VPS50Q96JG6 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
VPS50Q96JG6 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.54□□□□□ -1.84
VPS50Q96JG6 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VPS50Q96JG6 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS50Q96JG6 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS50Q96JG6 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS50Q96JG6 RNU6-283P-201ENST00000364788 107 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 SNORA73.2-201ENST00000364946 201 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 RNU6-715P-201ENST00000365204 103 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 SNORA5A-201ENST00000384111 134 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 RNU6-831P-201ENST00000384548 107 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 Y_RNA.529-201ENST00000384586 119 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 SNORA16.2-201ENST00000390991 127 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 SNORD70.1-201ENST00000391007 85 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 AL356432.1-201ENST00000405809 419 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.54□□□□□ -1.84
VPS50Q96JG6 RNU6-55P-201ENST00000411092 107 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 RNU6-954P-201ENST00000411355 107 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 RAB9AP3-201ENST00000412737 573 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 AL035423.1-201ENST00000420331 213 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.54□□□□□ -1.84
VPS50Q96JG6 AC245054.1-201ENST00000420944 258 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 AL160275.3-201ENST00000423876 471 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 MTCO3P46-201ENST00000425787 232 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 HMGB1P27-201ENST00000431429 603 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 GOT2P5-201ENST00000433995 546 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.54□□□□□ -1.84
VPS50Q96JG6 TAAR7P-201ENST00000436141 242 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 HIGD1AP11-201ENST00000438361 280 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 RAB9AP1-201ENST00000449393 573 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 AMD1P1-201ENST00000457220 922 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 SUMO2P6-201ENST00000505273 288 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS50Q96JG6 RNU6-914P-201ENST00000516749 109 ntBASIC3.54□□□□□ -1.84
VPS50Q96JG6 RNU7-30P-201ENST00000516835 62 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms