Protein–RNA interactions for Protein: Q96HJ3

CCDC34, Coiled-coil domain-containing protein 34, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC34Q96HJ3 SNORA75-201ENST00000384158 137 ntBASIC3.17□□□□□ -1.9
CCDC34Q96HJ3 RNU6-14P-201ENST00000384630 106 ntBASIC3.17□□□□□ -1.9
CCDC34Q96HJ3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC34Q96HJ3 AC009296.1-201ENST00000443146 155 ntBASIC3.17□□□□□ -1.9
CCDC34Q96HJ3 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC34Q96HJ3 AC139453.3-201ENST00000493276 369 ntBASIC3.17□□□□□ -1.9
CCDC34Q96HJ3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.17□□□□□ -1.9
CCDC34Q96HJ3 AC087883.1-201ENST00000551882 391 ntBASIC3.17□□□□□ -1.9
CCDC34Q96HJ3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC34Q96HJ3 AC103810.1-201ENST00000579873 453 ntBASIC3.17□□□□□ -1.9
CCDC34Q96HJ3 YPEL5P2-201ENST00000605553 359 ntBASIC3.17□□□□□ -1.9
CCDC34Q96HJ3 AP002360.4-201ENST00000606980 481 ntBASIC3.17□□□□□ -1.9
CCDC34Q96HJ3 AL451064.1-201ENST00000607718 471 ntBASIC3.17□□□□□ -1.9
CCDC34Q96HJ3 AC103591.3-201ENST00000608684 209 ntBASIC3.17□□□□□ -1.9
CCDC34Q96HJ3 AC004908.3-201ENST00000610248 625 ntBASIC3.17□□□□□ -1.9
CCDC34Q96HJ3 AC004777.1-201ENST00000624317 287 ntBASIC3.17□□□□□ -1.9
CCDC34Q96HJ3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC34Q96HJ3 Z99571.1-201ENST00000636677 394 ntBASIC3.17□□□□□ -1.9
CCDC34Q96HJ3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC34Q96HJ3 AC135776.4-201ENST00000624300 1904 ntBASIC3.17□□□□□ -1.9
CCDC34Q96HJ3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 SNORD46.1-201ENST00000364139 104 ntBASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 RNU6-282P-201ENST00000365357 103 ntBASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 MIR592-201ENST00000384959 97 ntBASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 DEFB108C-201ENST00000400154 252 ntBASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 SNRPEP9-201ENST00000436794 238 ntBASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 MTCYBP1-201ENST00000454315 1119 ntBASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 RPL26P9-201ENST00000457466 433 ntBASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 AC008571.1-201ENST00000467232 300 ntBASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 RNU6-677P-201ENST00000516914 101 ntBASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 OR5B19P-201ENST00000531766 928 ntBASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 MIR4444-1-201ENST00000581696 74 ntBASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 MIR4444-2-201ENST00000584390 74 ntBASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 AC073648.5-201ENST00000603502 305 ntBASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 AC104763.2-201ENST00000604179 382 ntBASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 AC034102.8-201ENST00000615146 484 ntBASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 AC048344.4-201ENST00000619744 527 ntBASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC34Q96HJ3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.15□□□□□ -1.9
CCDC34Q96HJ3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC34Q96HJ3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC34Q96HJ3 HSPE1P11-201ENST00000339579 310 ntBASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 VTRNA1-1-201ENST00000363120 99 ntBASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 RNU6-169P-201ENST00000365336 107 ntBASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 SNORA70.4-201ENST00000365509 134 ntBASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 RNU6-217P-201ENST00000384164 104 ntBASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 RNU6-456P-201ENST00000384493 107 ntBASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 RNU2-39P-201ENST00000410604 198 ntBASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 RPS12P24-201ENST00000412619 387 ntBASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 AL358075.3-201ENST00000426289 226 ntBASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 RPS15AP7-201ENST00000439294 405 ntBASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 MTCO2P29-201ENST00000465212 189 ntBASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 AC003982.1-202ENST00000469928 248 ntBASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 RPL23AP70-201ENST00000483361 460 ntBASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 AC007182.2-201ENST00000489251 402 ntBASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 AC108078.2-201ENST00000510750 236 ntBASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 AC113155.1-201ENST00000511141 769 ntBASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 RNU6-143P-201ENST00000516942 93 ntBASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 RNU6-430P-201ENST00000517078 107 ntBASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 ELOCP31-201ENST00000540463 467 ntBASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 BNIP3P9-201ENST00000603714 553 ntBASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 AC080013.6-201ENST00000606185 215 ntBASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 AC022893.3-201ENST00000607665 437 ntBASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC34Q96HJ3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC34Q96HJ3 RNA5SP387-201ENST00000364226 106 ntBASIC3.14□□□□□ -1.91
CCDC34Q96HJ3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC34Q96HJ3 RNU2-68P-201ENST00000410878 191 ntBASIC3.14□□□□□ -1.91
CCDC34Q96HJ3 RNA5SP111-201ENST00000411386 101 ntBASIC3.14□□□□□ -1.91
CCDC34Q96HJ3 USP9YP6-201ENST00000413550 854 ntBASIC3.14□□□□□ -1.91
CCDC34Q96HJ3 AC092047.1-201ENST00000424997 240 ntBASIC3.14□□□□□ -1.91
CCDC34Q96HJ3 AC098614.2-201ENST00000426040 255 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms