Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC073901.1-201ENST00000462471 408 ntBASIC2.74□□□□□ -1.97
VMP1Q96GC9 DYNLL1P5-201ENST00000467158 270 ntBASIC2.74□□□□□ -1.97
VMP1Q96GC9 AC023194.1-201ENST00000493084 308 ntBASIC2.74□□□□□ -1.97
VMP1Q96GC9 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.74□□□□□ -1.97
VMP1Q96GC9 MIR892C-201ENST00000516410 77 ntBASIC2.74□□□□□ -1.97
VMP1Q96GC9 RNU7-51P-201ENST00000516560 62 ntBASIC2.74□□□□□ -1.97
VMP1Q96GC9 ACA59.2-201ENST00000517061 156 ntBASIC2.74□□□□□ -1.97
VMP1Q96GC9 RNU6-1315P-201ENST00000517187 99 ntBASIC2.74□□□□□ -1.97
VMP1Q96GC9 AC004486.1-201ENST00000546846 233 ntBASIC2.74□□□□□ -1.97
VMP1Q96GC9 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.74□□□□□ -1.97
VMP1Q96GC9 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.74□□□□□ -1.97
VMP1Q96GC9 MYL12BP1-201ENST00000569826 507 ntBASIC2.74□□□□□ -1.97
VMP1Q96GC9 AC009127.3-201ENST00000570531 403 ntBASIC2.74□□□□□ -1.97
VMP1Q96GC9 MIR1273C-201ENST00000578669 77 ntBASIC2.74□□□□□ -1.97
VMP1Q96GC9 MIR3670-2-201ENST00000582974 65 ntBASIC2.74□□□□□ -1.97
VMP1Q96GC9 MIR3605-201ENST00000583214 100 ntBASIC2.74□□□□□ -1.97
VMP1Q96GC9 MIR3670-1-201ENST00000584160 65 ntBASIC2.74□□□□□ -1.97
VMP1Q96GC9 MIR3670-3-201ENST00000584855 65 ntBASIC2.74□□□□□ -1.97
VMP1Q96GC9 AL355816.2-201ENST00000610049 647 ntBASIC2.74□□□□□ -1.97
VMP1Q96GC9 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.74□□□□□ -1.97
VMP1Q96GC9 MIR3670-4-201ENST00000612260 65 ntBASIC2.74□□□□□ -1.97
VMP1Q96GC9 AL020991.1-201ENST00000612314 373 ntBASIC2.74□□□□□ -1.97
VMP1Q96GC9 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.74□□□□□ -1.97
VMP1Q96GC9 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
VMP1Q96GC9 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.73□□□□□ -1.97
VMP1Q96GC9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
VMP1Q96GC9 AL139276.1-201ENST00000311910 1001 ntBASIC2.73□□□□□ -1.97
VMP1Q96GC9 RNU6-898P-201ENST00000365627 104 ntBASIC2.73□□□□□ -1.97
VMP1Q96GC9 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.73□□□□□ -1.97
VMP1Q96GC9 RNU6-190P-201ENST00000384154 102 ntBASIC2.73□□□□□ -1.97
VMP1Q96GC9 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.73□□□□□ -1.97
VMP1Q96GC9 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.73□□□□□ -1.97
VMP1Q96GC9 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.73□□□□□ -1.97
VMP1Q96GC9 AC097463.2-201ENST00000421074 142 ntBASIC2.73□□□□□ -1.97
VMP1Q96GC9 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.73□□□□□ -1.97
VMP1Q96GC9 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.73□□□□□ -1.97
VMP1Q96GC9 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.73□□□□□ -1.97
VMP1Q96GC9 AL078601.1-201ENST00000444542 271 ntBASIC2.73□□□□□ -1.97
VMP1Q96GC9 RPL36AP48-201ENST00000485521 314 ntBASIC2.73□□□□□ -1.97
VMP1Q96GC9 AC096576.1-201ENST00000489014 359 ntBASIC2.73□□□□□ -1.97
VMP1Q96GC9 AC109927.2-201ENST00000506416 303 ntBASIC2.73□□□□□ -1.97
VMP1Q96GC9 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.73□□□□□ -1.97
VMP1Q96GC9 AC022022.2-201ENST00000602989 360 ntBASIC2.73□□□□□ -1.97
VMP1Q96GC9 AC105129.3-201ENST00000605455 485 ntBASIC2.73□□□□□ -1.97
VMP1Q96GC9 RNU6-87P-201ENST00000607561 108 ntBASIC2.73□□□□□ -1.97
VMP1Q96GC9 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
VMP1Q96GC9 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
VMP1Q96GC9 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.72□□□□□ -1.97
VMP1Q96GC9 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.72□□□□□ -1.97
VMP1Q96GC9 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.72□□□□□ -1.97
VMP1Q96GC9 RNU5F-6P-201ENST00000362979 116 ntBASIC2.72□□□□□ -1.97
VMP1Q96GC9 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
VMP1Q96GC9 RPL17P50-201ENST00000396131 546 ntBASIC2.72□□□□□ -1.97
VMP1Q96GC9 MIR1302-8-201ENST00000408342 128 ntBASIC2.72□□□□□ -1.97
VMP1Q96GC9 RNU6-1025P-201ENST00000410629 104 ntBASIC2.72□□□□□ -1.97
VMP1Q96GC9 AF274854.1-201ENST00000413236 615 ntBASIC2.72□□□□□ -1.97
VMP1Q96GC9 HIGD1AP15-201ENST00000416198 280 ntBASIC2.72□□□□□ -1.97
VMP1Q96GC9 AC003685.2-201ENST00000422795 395 ntBASIC2.72□□□□□ -1.97
VMP1Q96GC9 XKRYP1-201ENST00000423438 492 ntBASIC2.72□□□□□ -1.97
VMP1Q96GC9 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.72□□□□□ -1.97
VMP1Q96GC9 AC137499.1-201ENST00000427602 88 ntBASIC2.72□□□□□ -1.97
VMP1Q96GC9 AL139132.1-201ENST00000431587 344 ntBASIC2.72□□□□□ -1.97
VMP1Q96GC9 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.72□□□□□ -1.97
VMP1Q96GC9 XKRYP2-201ENST00000432915 492 ntBASIC2.72□□□□□ -1.97
VMP1Q96GC9 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.72□□□□□ -1.97
VMP1Q96GC9 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.72□□□□□ -1.97
VMP1Q96GC9 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.72□□□□□ -1.97
VMP1Q96GC9 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.72□□□□□ -1.97
VMP1Q96GC9 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.72□□□□□ -1.97
VMP1Q96GC9 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.72□□□□□ -1.97
VMP1Q96GC9 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.72□□□□□ -1.97
VMP1Q96GC9 Y_RNA.689-201ENST00000516589 107 ntBASIC2.72□□□□□ -1.97
VMP1Q96GC9 AP001372.4-201ENST00000524889 472 ntBASIC2.72□□□□□ -1.97
VMP1Q96GC9 AL157871.3-201ENST00000557231 293 ntBASIC2.72□□□□□ -1.97
VMP1Q96GC9 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.72□□□□□ -1.97
VMP1Q96GC9 AC012213.3-201ENST00000577199 777 ntBASIC2.72□□□□□ -1.97
VMP1Q96GC9 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.72□□□□□ -1.97
VMP1Q96GC9 AC015871.2-201ENST00000603605 948 ntBASIC2.72□□□□□ -1.97
VMP1Q96GC9 AC024581.2-201ENST00000619986 252 ntBASIC2.72□□□□□ -1.97
VMP1Q96GC9 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.72□□□□□ -1.97
VMP1Q96GC9 AC244517.12-201ENST00000623581 663 ntBASIC2.72□□□□□ -1.97
VMP1Q96GC9 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.72□□□□□ -1.97
VMP1Q96GC9 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VMP1Q96GC9 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.72□□□□□ -1.97
VMP1Q96GC9 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.71□□□□□ -1.98
VMP1Q96GC9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
VMP1Q96GC9 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.71□□□□□ -1.98
VMP1Q96GC9 RPL9P7-201ENST00000330965 580 ntBASIC2.71□□□□□ -1.98
VMP1Q96GC9 HSPE1P11-201ENST00000339579 310 ntBASIC2.71□□□□□ -1.98
VMP1Q96GC9 Y_RNA.33-201ENST00000362591 102 ntBASIC2.71□□□□□ -1.98
VMP1Q96GC9 SNORA40C-201ENST00000391285 128 ntBASIC2.71□□□□□ -1.98
VMP1Q96GC9 MRPL42P2-201ENST00000403169 426 ntBASIC2.71□□□□□ -1.98
VMP1Q96GC9 MTCYBP36-201ENST00000404146 440 ntBASIC2.71□□□□□ -1.98
VMP1Q96GC9 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.71□□□□□ -1.98
VMP1Q96GC9 COTL1P1-201ENST00000422309 375 ntBASIC2.71□□□□□ -1.98
VMP1Q96GC9 AL593851.1-201ENST00000426171 157 ntBASIC2.71□□□□□ -1.98
VMP1Q96GC9 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.71□□□□□ -1.98
VMP1Q96GC9 AC119618.1-201ENST00000434191 222 ntBASIC2.71□□□□□ -1.98
VMP1Q96GC9 RPS20P5-201ENST00000434808 360 ntBASIC2.71□□□□□ -1.98
VMP1Q96GC9 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms