Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.22□□□□□ -1.89
RTP4Q96DX8 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.22□□□□□ -1.89
RTP4Q96DX8 AL118558.2-201ENST00000556294 238 ntBASIC3.22□□□□□ -1.89
RTP4Q96DX8 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.22□□□□□ -1.89
RTP4Q96DX8 AC012182.1-201ENST00000570133 895 ntBASIC3.22□□□□□ -1.89
RTP4Q96DX8 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.22□□□□□ -1.89
RTP4Q96DX8 AC006254.3-201ENST00000603353 884 ntBASIC3.22□□□□□ -1.89
RTP4Q96DX8 AC012443.1-201ENST00000605605 231 ntBASIC3.22□□□□□ -1.89
RTP4Q96DX8 AL132765.2-201ENST00000610812 351 ntBASIC3.22□□□□□ -1.89
RTP4Q96DX8 TUG1_2.1-201ENST00000614234 87 ntBASIC3.22□□□□□ -1.89
RTP4Q96DX8 AL450472.3-201ENST00000615578 367 ntBASIC3.22□□□□□ -1.89
RTP4Q96DX8 AL021368.2-201ENST00000606125 5352 ntBASIC3.22□□□□□ -1.89
RTP4Q96DX8 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RTP4Q96DX8 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
RTP4Q96DX8 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RTP4Q96DX8 AC093831.2-201ENST00000624393 3427 ntBASIC3.22□□□□□ -1.89
RTP4Q96DX8 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
RTP4Q96DX8 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.22□□□□□ -1.89
RTP4Q96DX8 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.21□□□□□ -1.89
RTP4Q96DX8 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RTP4Q96DX8 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.21□□□□□ -1.9
RTP4Q96DX8 RNA5SP374-201ENST00000362939 125 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 SNORA7.2-201ENST00000364446 145 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 RNU6-61P-201ENST00000365528 109 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RTP4Q96DX8 SNORA7.4-201ENST00000384249 137 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 MT-TD-201ENST00000387419 68 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 AL122016.1-201ENST00000403365 367 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 AL357075.1-201ENST00000404107 726 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 RNU6-373P-201ENST00000411247 98 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 AC007390.1-201ENST00000415722 356 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.21□□□□□ -1.9
RTP4Q96DX8 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.21□□□□□ -1.9
RTP4Q96DX8 AC099677.1-201ENST00000420575 175 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 AL645937.1-202ENST00000421799 937 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 BEND7P1-201ENST00000422058 457 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.21□□□□□ -1.9
RTP4Q96DX8 RPL21P112-201ENST00000434403 463 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 AL162389.1-201ENST00000449233 177 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 RPS24P6-201ENST00000452670 400 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 AC234775.1-201ENST00000454247 670 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 SNRPGP5-201ENST00000456003 220 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 AL136097.1-201ENST00000456945 913 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 RNU7-182P-201ENST00000459009 62 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 RN7SL75P-201ENST00000461926 281 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 AC010631.1-201ENST00000474150 156 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.21□□□□□ -1.9
RTP4Q96DX8 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RTP4Q96DX8 RPL7P23-201ENST00000493874 747 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.21□□□□□ -1.9
RTP4Q96DX8 AC105417.1-201ENST00000514691 285 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 RNU4-29P-201ENST00000515943 174 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 Y_RNA.675-201ENST00000516389 149 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 RNU7-30P-201ENST00000516835 62 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 RNU6-1314P-201ENST00000517139 104 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.21□□□□□ -1.9
RTP4Q96DX8 AC018630.1-201ENST00000541376 925 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 AC078814.3-201ENST00000553036 491 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.21□□□□□ -1.9
RTP4Q96DX8 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.21□□□□□ -1.9
RTP4Q96DX8 MIR3186-201ENST00000577404 85 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 MIR4703-201ENST00000577728 79 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 MIR5004-201ENST00000579078 107 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 MIR4325-201ENST00000583049 90 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 AC087045.1-201ENST00000605856 382 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 AC010133.1-201ENST00000615809 842 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 AC004925.1-201ENST00000624256 2706 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 TAB3P1-202ENST00000452645 1634 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.21□□□□□ -1.9
RTP4Q96DX8 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RTP4Q96DX8 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RTP4Q96DX8 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RTP4Q96DX8 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
RTP4Q96DX8 AL035425.3-201ENST00000564206 4996 ntBASIC3.21□□□□□ -1.9
RTP4Q96DX8 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.2□□□□□ -1.9
RTP4Q96DX8 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RTP4Q96DX8 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
RTP4Q96DX8 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RTP4Q96DX8 AL139276.1-201ENST00000311910 1001 ntBASIC3.2□□□□□ -1.9
RTP4Q96DX8 SNORA31-201ENST00000362607 130 ntBASIC3.2□□□□□ -1.9
RTP4Q96DX8 Y_RNA.58-201ENST00000362807 102 ntBASIC3.2□□□□□ -1.9
RTP4Q96DX8 Y_RNA.154-201ENST00000363624 102 ntBASIC3.2□□□□□ -1.9
RTP4Q96DX8 Y_RNA.184-201ENST00000363884 108 ntBASIC3.2□□□□□ -1.9
RTP4Q96DX8 RNY3P1-201ENST00000365085 102 ntBASIC3.2□□□□□ -1.9
RTP4Q96DX8 RNY3-201ENST00000365484 102 ntBASIC3.2□□□□□ -1.9
RTP4Q96DX8 SMIM11P1-201ENST00000369586 178 ntBASIC3.2□□□□□ -1.9
RTP4Q96DX8 Y_RNA.490-201ENST00000384413 102 ntBASIC3.2□□□□□ -1.9
RTP4Q96DX8 SNORD37.1-201ENST00000390968 65 ntBASIC3.2□□□□□ -1.9
RTP4Q96DX8 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.2□□□□□ -1.9
RTP4Q96DX8 RNU4-65P-201ENST00000410473 140 ntBASIC3.2□□□□□ -1.9
RTP4Q96DX8 NDUFB4P5-201ENST00000415445 361 ntBASIC3.2□□□□□ -1.9
RTP4Q96DX8 AC016831.2-201ENST00000417179 352 ntBASIC3.2□□□□□ -1.9
RTP4Q96DX8 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.2□□□□□ -1.9
RTP4Q96DX8 RPL35AP12-201ENST00000425362 338 ntBASIC3.2□□□□□ -1.9
RTP4Q96DX8 AC079780.1-201ENST00000428259 207 ntBASIC3.2□□□□□ -1.9
RTP4Q96DX8 RPL35AP22-201ENST00000436855 335 ntBASIC3.2□□□□□ -1.9
RTP4Q96DX8 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
RTP4Q96DX8 RPL7P12-201ENST00000446719 750 ntBASIC3.2□□□□□ -1.9
RTP4Q96DX8 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.2□□□□□ -1.9
RTP4Q96DX8 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms