Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 AC117522.1-201ENST00000509821 380 ntBASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 AC098591.2-201ENST00000510152 315 ntBASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 AC114781.4-201ENST00000513707 639 ntBASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 Y_RNA.688-201ENST00000516565 95 ntBASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 Vault.3-201ENST00000516676 95 ntBASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 RNU6-914P-201ENST00000516749 109 ntBASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 AC104027.1-201ENST00000521887 300 ntBASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 AL121821.2-201ENST00000556081 394 ntBASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 OR1M4P-201ENST00000589199 287 ntBASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 AC110760.3-201ENST00000598794 467 ntBASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 AC131902.3-201ENST00000611767 581 ntBASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 AL359547.2-201ENST00000615810 418 ntBASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 AC004520.1-201ENST00000608362 1413 ntBASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 AC073325.2-201ENST00000339545 159 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 SNORD56.3-201ENST00000363507 71 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 RNU4-1-201ENST00000363925 141 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 RNU6-39P-201ENST00000384344 107 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 RPL21P75-201ENST00000396599 483 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 AL512633.1-201ENST00000399931 655 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 RPL21P28-201ENST00000401418 483 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 AL592114.1-201ENST00000403842 483 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 USP9YP6-201ENST00000413550 854 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 RPL7P10-201ENST00000417407 739 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 AL161651.1-201ENST00000440882 223 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 AL136380.1-201ENST00000447970 162 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 HMGN2P10-201ENST00000448085 265 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 NIPA2P5-201ENST00000452282 464 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 AL590639.1-201ENST00000456484 337 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 RPL21P39-201ENST00000463605 483 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 TRBV1-201ENST00000476502 284 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 AC126389.1-201ENST00000477436 290 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 RPL21P93-201ENST00000480465 489 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 AC087190.1-201ENST00000484462 480 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 AC093591.1-201ENST00000491435 481 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 RPL21P16-201ENST00000495531 483 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 RNU6-703P-201ENST00000516946 107 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 RNU2-46P-201ENST00000517038 113 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 RNU6-1315P-201ENST00000517187 99 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 SCARNA20.6-201ENST00000517251 106 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 AP003122.3-201ENST00000526316 255 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 AC084851.1-201ENST00000529105 249 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 AC006199.1-201ENST00000548728 219 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 ADI1P3-201ENST00000549509 470 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 AL590229.1-201ENST00000603497 542 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 Z94722.1-201ENST00000604328 474 ntBASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.66□□□□□ -1.98
SNRNP40Q96DI7 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
SNRNP40Q96DI7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 FGF7P2-201ENST00000332473 296 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 SNORA68.1-201ENST00000364537 132 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 RN7SKP226-201ENST00000364912 300 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 MIR196B-201ENST00000384852 84 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 MIR147B-201ENST00000390185 80 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 RNU6-1025P-201ENST00000410629 104 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 RNA5SP508-201ENST00000411327 119 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 ISCA1P6-201ENST00000427740 390 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 MED13P1-201ENST00000428342 171 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 AC092427.1-202ENST00000430569 476 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 AL591704.1-201ENST00000432574 275 ntBASIC2.65□□□□□ -1.99
SNRNP40Q96DI7 RPS15AP7-201ENST00000439294 405 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms