Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC104850.1-201ENST00000435940 476 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.68□□□□□ -1.98
RFT1Q96AA3 RPL21P133-201ENST00000443666 476 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 MTND1P1-201ENST00000445453 368 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 AL358232.1-201ENST00000448030 501 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.68□□□□□ -1.98
RFT1Q96AA3 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.68□□□□□ -1.98
RFT1Q96AA3 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.68□□□□□ -1.98
RFT1Q96AA3 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.68□□□□□ -1.98
RFT1Q96AA3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.68□□□□□ -1.98
RFT1Q96AA3 FAM133DP-201ENST00000464802 691 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 KLF3P2-201ENST00000465138 268 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 RPS27AP9-201ENST00000477681 438 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 RN7SL293P-201ENST00000481765 281 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 AC011352.1-201ENST00000512300 793 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 RNU6-826P-201ENST00000516827 104 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 RNU6-703P-201ENST00000516946 107 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 HMGB1P41-201ENST00000520234 440 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 AP003122.3-201ENST00000526316 255 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.68□□□□□ -1.98
RFT1Q96AA3 AC084851.1-201ENST00000529105 249 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 AC087883.1-201ENST00000551882 391 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 NCAPGP2-201ENST00000557911 754 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 H3F3AP1-201ENST00000559984 334 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 TPRKBP2-201ENST00000565969 475 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 AC034105.4-201ENST00000568304 277 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.68□□□□□ -1.98
RFT1Q96AA3 NRBF2P1-201ENST00000587407 859 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.68□□□□□ -1.98
RFT1Q96AA3 MTND4LP5-201ENST00000605152 292 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.68□□□□□ -1.98
RFT1Q96AA3 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.68□□□□□ -1.98
RFT1Q96AA3 AC099654.12-201ENST00000639868 649 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RFT1Q96AA3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
RFT1Q96AA3 AC110491.1-201ENST00000562191 2010 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 MTCO1P12-201ENST00000414273 1543 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RFT1Q96AA3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.68□□□□□ -1.98
RFT1Q96AA3 MTND5P26-201ENST00000426018 1752 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RFT1Q96AA3 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RFT1Q96AA3 RNU1-33P-201ENST00000364249 162 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 RN7SKP226-201ENST00000364912 300 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.67□□□□□ -1.98
RFT1Q96AA3 RNU6-259P-201ENST00000383999 107 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 RNU6-190P-201ENST00000384154 102 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 Y_RNA.554-201ENST00000384672 102 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 MIR558-201ENST00000384920 94 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 RNA5SP354-201ENST00000391247 136 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 AL139095.1-201ENST00000404326 391 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 AC023141.4-201ENST00000412031 328 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.67□□□□□ -1.98
RFT1Q96AA3 AL096701.2-201ENST00000416920 238 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 AL513477.1-202ENST00000417061 214 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.67□□□□□ -1.98
RFT1Q96AA3 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.67□□□□□ -1.98
RFT1Q96AA3 MTCYBP5-201ENST00000423752 1135 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 AC098614.2-201ENST00000426040 255 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 AC092017.2-201ENST00000427600 362 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 AL592045.1-201ENST00000429867 352 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 AL591212.2-201ENST00000433923 257 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.67□□□□□ -1.98
RFT1Q96AA3 RPS15AP5-201ENST00000436276 388 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 AC005019.1-201ENST00000436455 431 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 AC098831.1-201ENST00000440661 216 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 RBMX2P4-201ENST00000441256 376 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 AC244505.5-201ENST00000443639 207 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 AL136380.1-201ENST00000447970 162 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 RPL37P4-201ENST00000448908 268 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 GAPDHP17-201ENST00000449858 1001 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 MTATP6P7-201ENST00000453315 681 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.67□□□□□ -1.98
RFT1Q96AA3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.67□□□□□ -1.98
RFT1Q96AA3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.67□□□□□ -1.98
RFT1Q96AA3 SAP18P1-201ENST00000512058 390 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 Vault.3-201ENST00000516676 95 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 AP003072.2-201ENST00000527756 676 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.67□□□□□ -1.98
RFT1Q96AA3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.67□□□□□ -1.98
RFT1Q96AA3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
RFT1Q96AA3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.67□□□□□ -1.98
RFT1Q96AA3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.67□□□□□ -1.98
RFT1Q96AA3 MIR3167-201ENST00000579623 85 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.67□□□□□ -1.98
RFT1Q96AA3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.67□□□□□ -1.98
RFT1Q96AA3 AC024220.1-201ENST00000603675 484 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 BNIP3P9-201ENST00000603714 553 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 AL109618.2-201ENST00000605527 211 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 AC007684.1-201ENST00000609671 477 ntBASIC2.67□□□□□ -1.98
RFT1Q96AA3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
RFT1Q96AA3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
RFT1Q96AA3 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RFT1Q96AA3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
RFT1Q96AA3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
RFT1Q96AA3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RFT1Q96AA3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.66□□□□□ -1.98
RFT1Q96AA3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
RFT1Q96AA3 OR5J1P-201ENST00000313544 939 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms