Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.5□□□□□ -1.69
BRF1Q92994 AC107016.1-201ENST00000550463 337 ntBASIC4.5□□□□□ -1.69
BRF1Q92994 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.5□□□□□ -1.69
BRF1Q92994 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.5□□□□□ -1.69
BRF1Q92994 AC004817.2-201ENST00000561794 651 ntBASIC4.5□□□□□ -1.69
BRF1Q92994 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.5□□□□□ -1.69
BRF1Q92994 AC007224.1-201ENST00000564410 144 ntBASIC4.5□□□□□ -1.69
BRF1Q92994 MIR4503-201ENST00000582187 83 ntBASIC4.5□□□□□ -1.69
BRF1Q92994 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.5□□□□□ -1.69
BRF1Q92994 AC011494.1-201ENST00000596454 237 ntBASIC4.5□□□□□ -1.69
BRF1Q92994 AC006006.1-201ENST00000603082 144 ntBASIC4.5□□□□□ -1.69
BRF1Q92994 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
BRF1Q92994 AC007485.1-201ENST00000616755 206 ntBASIC4.5□□□□□ -1.69
BRF1Q92994 FP236240.3-201ENST00000623061 327 ntBASIC4.5□□□□□ -1.69
BRF1Q92994 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.5□□□□□ -1.69
BRF1Q92994 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.5□□□□□ -1.69
BRF1Q92994 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
BRF1Q92994 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
BRF1Q92994 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.5□□□□□ -1.69
BRF1Q92994 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.49□□□□□ -1.69
BRF1Q92994 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
BRF1Q92994 NCAPGP1-201ENST00000505112 1814 ntBASIC4.49□□□□□ -1.69
BRF1Q92994 AC004925.1-201ENST00000624256 2706 ntBASIC4.49□□□□□ -1.69
BRF1Q92994 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
BRF1Q92994 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
BRF1Q92994 Y_RNA.364-201ENST00000365532 101 ntBASIC4.49□□□□□ -1.69
BRF1Q92994 U1.1-201ENST00000384101 164 ntBASIC4.49□□□□□ -1.69
BRF1Q92994 RNU6-574P-201ENST00000384265 107 ntBASIC4.49□□□□□ -1.69
BRF1Q92994 PPIAP31-201ENST00000405422 495 ntBASIC4.49□□□□□ -1.69
BRF1Q92994 AL513331.1-201ENST00000411908 397 ntBASIC4.49□□□□□ -1.69
BRF1Q92994 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.49□□□□□ -1.69
BRF1Q92994 MTCYBP10-201ENST00000424905 650 ntBASIC4.49□□□□□ -1.69
BRF1Q92994 USMG5P1-201ENST00000425964 177 ntBASIC4.49□□□□□ -1.69
BRF1Q92994 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.49□□□□□ -1.69
BRF1Q92994 AL360271.2-201ENST00000447710 161 ntBASIC4.49□□□□□ -1.69
BRF1Q92994 HSPE1P6-201ENST00000479457 291 ntBASIC4.49□□□□□ -1.69
BRF1Q92994 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.49□□□□□ -1.69
BRF1Q92994 SCARNA14-201ENST00000516903 136 ntBASIC4.49□□□□□ -1.69
BRF1Q92994 MIR2116-201ENST00000517221 80 ntBASIC4.49□□□□□ -1.69
BRF1Q92994 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.49□□□□□ -1.69
BRF1Q92994 COX6CP5-201ENST00000527162 228 ntBASIC4.49□□□□□ -1.69
BRF1Q92994 SNRPGP16-201ENST00000533275 226 ntBASIC4.49□□□□□ -1.69
BRF1Q92994 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.49□□□□□ -1.69
BRF1Q92994 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.49□□□□□ -1.69
BRF1Q92994 AC010653.1-201ENST00000571108 881 ntBASIC4.49□□□□□ -1.69
BRF1Q92994 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.49□□□□□ -1.69
BRF1Q92994 AL137849.1-201ENST00000604767 169 ntBASIC4.49□□□□□ -1.69
BRF1Q92994 BRDTP1-201ENST00000605735 677 ntBASIC4.49□□□□□ -1.69
BRF1Q92994 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
BRF1Q92994 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.49□□□□□ -1.69
BRF1Q92994 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
BRF1Q92994 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
BRF1Q92994 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
BRF1Q92994 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
BRF1Q92994 FAM35DP-201ENST00000323387 2712 ntBASIC4.48□□□□□ -1.69
BRF1Q92994 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
BRF1Q92994 RNU6-1303P-201ENST00000364841 107 ntBASIC4.48□□□□□ -1.69
BRF1Q92994 RNU1-115P-201ENST00000365329 160 ntBASIC4.48□□□□□ -1.69
BRF1Q92994 Y_RNA.452-201ENST00000384202 108 ntBASIC4.48□□□□□ -1.69
BRF1Q92994 Y_RNA.473-201ENST00000384333 102 ntBASIC4.48□□□□□ -1.69
BRF1Q92994 RNU6-331P-201ENST00000384724 107 ntBASIC4.48□□□□□ -1.69
BRF1Q92994 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
BRF1Q92994 USP9YP30-201ENST00000430729 455 ntBASIC4.48□□□□□ -1.69
BRF1Q92994 AC091390.1-201ENST00000433904 331 ntBASIC4.48□□□□□ -1.69
BRF1Q92994 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.48□□□□□ -1.69
BRF1Q92994 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.48□□□□□ -1.69
BRF1Q92994 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.48□□□□□ -1.69
BRF1Q92994 RN7SL323P-201ENST00000494712 295 ntBASIC4.48□□□□□ -1.69
BRF1Q92994 AC015911.1-201ENST00000495111 156 ntBASIC4.48□□□□□ -1.69
BRF1Q92994 APOOP4-201ENST00000513530 597 ntBASIC4.48□□□□□ -1.69
BRF1Q92994 AC090281.1-201ENST00000523019 276 ntBASIC4.48□□□□□ -1.69
BRF1Q92994 LRRC37A5P-203ENST00000580181 585 ntBASIC4.48□□□□□ -1.69
BRF1Q92994 BNIP3P16-201ENST00000589779 534 ntBASIC4.48□□□□□ -1.69
BRF1Q92994 HMGN2P28-201ENST00000606102 262 ntBASIC4.48□□□□□ -1.69
BRF1Q92994 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.48□□□□□ -1.69
BRF1Q92994 AL031601.2-202ENST00000622650 282 ntBASIC4.48□□□□□ -1.69
BRF1Q92994 AL732372.2-225ENST00000642124 456 ntBASIC4.48□□□□□ -1.69
BRF1Q92994 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
BRF1Q92994 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
BRF1Q92994 ZNF285B-201ENST00000561698 1767 ntBASIC4.48□□□□□ -1.69
BRF1Q92994 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
BRF1Q92994 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.47□□□□□ -1.69
BRF1Q92994 AC005183.1-201ENST00000603687 1979 ntBASIC4.47□□□□□ -1.69
BRF1Q92994 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
BRF1Q92994 AC138393.1-203ENST00000327086 343 ntBASIC4.47□□□□□ -1.69
BRF1Q92994 RNU1-18P-201ENST00000363062 164 ntBASIC4.47□□□□□ -1.69
BRF1Q92994 RNU6-173P-201ENST00000364215 104 ntBASIC4.47□□□□□ -1.69
BRF1Q92994 RNU6-1329P-201ENST00000365664 107 ntBASIC4.47□□□□□ -1.69
BRF1Q92994 Y_RNA.401-201ENST00000383965 117 ntBASIC4.47□□□□□ -1.69
BRF1Q92994 Y_RNA.496-201ENST00000384444 101 ntBASIC4.47□□□□□ -1.69
BRF1Q92994 RPL23AP48-201ENST00000406913 488 ntBASIC4.47□□□□□ -1.69
BRF1Q92994 RNU6-628P-201ENST00000410675 107 ntBASIC4.47□□□□□ -1.69
BRF1Q92994 RNU6-607P-201ENST00000411283 108 ntBASIC4.47□□□□□ -1.69
BRF1Q92994 AC008267.5-201ENST00000424928 265 ntBASIC4.47□□□□□ -1.69
BRF1Q92994 RN7SL93P-201ENST00000463035 293 ntBASIC4.47□□□□□ -1.69
BRF1Q92994 AP000926.1-201ENST00000479573 241 ntBASIC4.47□□□□□ -1.69
BRF1Q92994 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.47□□□□□ -1.69
BRF1Q92994 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.47□□□□□ -1.69
BRF1Q92994 AC116655.1-201ENST00000508324 901 ntBASIC4.47□□□□□ -1.69
BRF1Q92994 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms