Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
SH3RF3Q8TEJ3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SH3RF3Q8TEJ3 KPNA2P1-201ENST00000458289 1591 ntBASIC4.26□□□□□ -1.73
SH3RF3Q8TEJ3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SH3RF3Q8TEJ3 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 HSPE1P11-201ENST00000339579 310 ntBASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 SNORD113-7-201ENST00000363762 77 ntBASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 RNU6-99P-201ENST00000364721 107 ntBASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 RNU6-472P-201ENST00000384299 107 ntBASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 RNU6-601P-201ENST00000384540 107 ntBASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 Y_RNA.552-201ENST00000384665 112 ntBASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 SNORA19-201ENST00000384737 128 ntBASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 SNORD17-201ENST00000390930 237 ntBASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 AC137499.1-201ENST00000427602 88 ntBASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 USP9YP7-201ENST00000436723 430 ntBASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 AL356535.1-201ENST00000440335 398 ntBASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 RPL7P52-201ENST00000449200 742 ntBASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 USP9YP32-201ENST00000452432 430 ntBASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 U3.44-201ENST00000458938 192 ntBASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 Y_RNA.654-201ENST00000497848 106 ntBASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 AC079140.5-201ENST00000507882 310 ntBASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 RNU6-789P-201ENST00000517105 102 ntBASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 AC023043.2-201ENST00000589678 1026 ntBASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 AC103710.2-201ENST00000609912 942 ntBASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 uc_338.12-201ENST00000616344 181 ntBASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SH3RF3Q8TEJ3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 SNORA62.1-201ENST00000364287 154 ntBASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 RNA5SP167-201ENST00000365461 116 ntBASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 SNORA75B-201ENST00000384053 137 ntBASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 RNU6-441P-201ENST00000384545 106 ntBASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 AL360182.1-201ENST00000397433 468 ntBASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 HSPE1P8-201ENST00000406997 288 ntBASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 RNU2-29P-201ENST00000410423 189 ntBASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 OR2AS1P-201ENST00000427827 319 ntBASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 FTH1P6-201ENST00000430768 320 ntBASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 MTCO3P45-201ENST00000443036 613 ntBASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 HIGD1AP3-201ENST00000515857 278 ntBASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 AP000907.2-201ENST00000530827 353 ntBASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 AC023157.2-201ENST00000540596 141 ntBASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 MIR4703-201ENST00000577728 79 ntBASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 AC133104.2-201ENST00000615272 193 ntBASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 AL355365.1-201ENST00000616480 294 ntBASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SH3RF3Q8TEJ3 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SH3RF3Q8TEJ3 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SH3RF3Q8TEJ3 RNA5SP267-201ENST00000364893 126 ntBASIC4.23□□□□□ -1.73
SH3RF3Q8TEJ3 SNORD116-11-201ENST00000383882 92 ntBASIC4.23□□□□□ -1.73
SH3RF3Q8TEJ3 RNU6-1029P-201ENST00000384109 107 ntBASIC4.23□□□□□ -1.73
SH3RF3Q8TEJ3 SNORA9-201ENST00000384215 133 ntBASIC4.23□□□□□ -1.73
SH3RF3Q8TEJ3 RNU6-921P-201ENST00000384361 107 ntBASIC4.23□□□□□ -1.73
SH3RF3Q8TEJ3 MIR558-201ENST00000384920 94 ntBASIC4.23□□□□□ -1.73
SH3RF3Q8TEJ3 AC016769.3-201ENST00000396562 315 ntBASIC4.23□□□□□ -1.73
SH3RF3Q8TEJ3 RN7SKP53-201ENST00000411337 315 ntBASIC4.23□□□□□ -1.73
SH3RF3Q8TEJ3 PSMA6P3-201ENST00000428242 164 ntBASIC4.23□□□□□ -1.73
SH3RF3Q8TEJ3 HMGB1P9-201ENST00000429856 646 ntBASIC4.23□□□□□ -1.73
SH3RF3Q8TEJ3 SNRPGP5-201ENST00000456003 220 ntBASIC4.23□□□□□ -1.73
SH3RF3Q8TEJ3 MTCO3P2-201ENST00000457365 171 ntBASIC4.23□□□□□ -1.73
SH3RF3Q8TEJ3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.23□□□□□ -1.73
SH3RF3Q8TEJ3 RNU7-182P-201ENST00000459009 62 ntBASIC4.23□□□□□ -1.73
SH3RF3Q8TEJ3 RPL23AP41-201ENST00000484754 458 ntBASIC4.23□□□□□ -1.73
SH3RF3Q8TEJ3 BTF3L4P4-201ENST00000506381 449 ntBASIC4.23□□□□□ -1.73
SH3RF3Q8TEJ3 AC026784.1-201ENST00000507986 352 ntBASIC4.23□□□□□ -1.73
SH3RF3Q8TEJ3 MTND1P19-201ENST00000511780 315 ntBASIC4.23□□□□□ -1.73
SH3RF3Q8TEJ3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.23□□□□□ -1.73
SH3RF3Q8TEJ3 AC023141.12-201ENST00000512399 199 ntBASIC4.23□□□□□ -1.73
SH3RF3Q8TEJ3 Y_RNA.661-201ENST00000516003 99 ntBASIC4.23□□□□□ -1.73
SH3RF3Q8TEJ3 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.23□□□□□ -1.73
SH3RF3Q8TEJ3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms