Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 UBE2L2-201ENST00000254302 429 ntBASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 RNA5SP479-201ENST00000364858 117 ntBASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 Y_RNA.387-201ENST00000383918 102 ntBASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 RNA5SP424-201ENST00000390988 115 ntBASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 MIR548K-201ENST00000408406 116 ntBASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 RPLP0P7-201ENST00000416050 667 ntBASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 SAR1AP4-201ENST00000429225 591 ntBASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 HSPD1P21-201ENST00000436541 245 ntBASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 RN7SL323P-201ENST00000494712 295 ntBASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 SNORA70.16-201ENST00000516390 95 ntBASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 RNU6-1069P-201ENST00000516612 133 ntBASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 RNU6-256P-201ENST00000516747 97 ntBASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 RNA5SP471-201ENST00000516971 106 ntBASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 MIR3672-201ENST00000584290 82 ntBASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 POLR3GP2-201ENST00000588366 668 ntBASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 AL020997.2-201ENST00000602607 184 ntBASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 AP002826.1-201ENST00000608835 315 ntBASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 AL354798.1-201ENST00000622505 329 ntBASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 AC112200.1-201ENST00000625015 234 ntBASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 AL353746.1-201ENST00000566293 6881 ntBASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 RNU6-1252P-201ENST00000363054 104 ntBASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 RNU6-1167P-201ENST00000363227 94 ntBASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 RNU6-45P-201ENST00000384471 107 ntBASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 VN1R36P-201ENST00000414936 291 ntBASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 RPL27AP8-201ENST00000424277 446 ntBASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 AL451062.2-201ENST00000427515 271 ntBASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 AC092017.2-201ENST00000427600 362 ntBASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 SETP5-201ENST00000437270 562 ntBASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 SNORA71B-202ENST00000439232 272 ntBASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 Y_RNA.632-201ENST00000459189 102 ntBASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 RN7SL330P-201ENST00000469709 307 ntBASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 RNA5SP208-201ENST00000516156 78 ntBASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 RNU6-566P-201ENST00000516790 107 ntBASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 AC093331.1-201ENST00000521474 169 ntBASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 AC004024.1-201ENST00000549244 247 ntBASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 AC023043.2-201ENST00000589678 1026 ntBASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 AC002545.1-201ENST00000592511 181 ntBASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 AC098826.3-201ENST00000603823 466 ntBASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 AL161798.1-201ENST00000604630 131 ntBASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 ATP1B3P1-201ENST00000605365 821 ntBASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 AC016727.1-205ENST00000605437 569 ntBASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 AC107294.1-201ENST00000609524 467 ntBASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
CCHCR1Q8TD31 ZNF285B-201ENST00000561698 1767 ntBASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 RNU6-283P-201ENST00000364788 107 ntBASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 SNORA4.3-201ENST00000365564 137 ntBASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 Y_RNA.384-201ENST00000383909 102 ntBASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 Y_RNA.431-201ENST00000384086 102 ntBASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 RPL21P66-201ENST00000426566 466 ntBASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 AL356867.1-201ENST00000429623 299 ntBASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 RPS29P7-201ENST00000439662 171 ntBASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 AC007677.1-201ENST00000445757 515 ntBASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 RPL7P5-201ENST00000471472 736 ntBASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 SUMO2P6-201ENST00000505273 288 ntBASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 Y_RNA.682-201ENST00000516457 100 ntBASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 RNU6-1256P-201ENST00000516539 103 ntBASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 RNU6-1153P-201ENST00000516760 105 ntBASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 ANP32BP3-201ENST00000559213 706 ntBASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 MIR5685-201ENST00000579080 79 ntBASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 MIR5692C1-201ENST00000585309 91 ntBASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 AL670379.10-201ENST00000604330 253 ntBASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 AL670379.9-201ENST00000605428 253 ntBASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 SNORA62.6-201ENST00000606322 83 ntBASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 FAM157A-202ENST00000615155 405 ntBASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CCHCR1Q8TD31 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms