Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 MTATP6P18-201ENST00000417994 673 ntBASIC2.26□□□□□ -2.05
LINC01006Q8NI28 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.26□□□□□ -2.05
LINC01006Q8NI28 NDUFB4P7-201ENST00000423198 363 ntBASIC2.26□□□□□ -2.05
LINC01006Q8NI28 TMEM167AP1-201ENST00000423409 219 ntBASIC2.26□□□□□ -2.05
LINC01006Q8NI28 ISCA1P1-201ENST00000426679 387 ntBASIC2.26□□□□□ -2.05
LINC01006Q8NI28 NDUFB4P6-201ENST00000436819 366 ntBASIC2.26□□□□□ -2.05
LINC01006Q8NI28 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.26□□□□□ -2.05
LINC01006Q8NI28 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LINC01006Q8NI28 NIPA2P5-201ENST00000452282 464 ntBASIC2.26□□□□□ -2.05
LINC01006Q8NI28 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.26□□□□□ -2.05
LINC01006Q8NI28 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.26□□□□□ -2.05
LINC01006Q8NI28 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.26□□□□□ -2.05
LINC01006Q8NI28 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.26□□□□□ -2.05
LINC01006Q8NI28 ARL4AP2-201ENST00000507378 601 ntBASIC2.26□□□□□ -2.05
LINC01006Q8NI28 AC010493.1-201ENST00000513479 292 ntBASIC2.26□□□□□ -2.05
LINC01006Q8NI28 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.26□□□□□ -2.05
LINC01006Q8NI28 RNA5SP471-201ENST00000516971 106 ntBASIC2.26□□□□□ -2.05
LINC01006Q8NI28 RN7SKP258-201ENST00000517151 304 ntBASIC2.26□□□□□ -2.05
LINC01006Q8NI28 AC104027.1-201ENST00000521887 300 ntBASIC2.26□□□□□ -2.05
LINC01006Q8NI28 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.26□□□□□ -2.05
LINC01006Q8NI28 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.26□□□□□ -2.05
LINC01006Q8NI28 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.26□□□□□ -2.05
LINC01006Q8NI28 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
LINC01006Q8NI28 AK6P1-201ENST00000540219 478 ntBASIC2.26□□□□□ -2.05
LINC01006Q8NI28 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.26□□□□□ -2.05
LINC01006Q8NI28 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.26□□□□□ -2.05
LINC01006Q8NI28 AC013412.1-201ENST00000610687 192 ntBASIC2.26□□□□□ -2.05
LINC01006Q8NI28 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.26□□□□□ -2.05
LINC01006Q8NI28 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.26□□□□□ -2.05
LINC01006Q8NI28 MIR6076-201ENST00000617521 113 ntBASIC2.26□□□□□ -2.05
LINC01006Q8NI28 AC006111.3-201ENST00000622137 383 ntBASIC2.26□□□□□ -2.05
LINC01006Q8NI28 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.26□□□□□ -2.05
LINC01006Q8NI28 CR381653.2-201ENST00000624041 768 ntBASIC2.26□□□□□ -2.05
LINC01006Q8NI28 AC009161.2-201ENST00000624626 138 ntBASIC2.26□□□□□ -2.05
LINC01006Q8NI28 SEPT14P19-203ENST00000633205 211 ntBASIC2.26□□□□□ -2.05
LINC01006Q8NI28 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LINC01006Q8NI28 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
LINC01006Q8NI28 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.26□□□□□ -2.05
LINC01006Q8NI28 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LINC01006Q8NI28 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LINC01006Q8NI28 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LINC01006Q8NI28 AL359693.1-201ENST00000614959 2407 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LINC01006Q8NI28 Y_RNA.6-201ENST00000362350 114 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 RNU4-82P-201ENST00000362443 140 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 RNU6-960P-201ENST00000364056 120 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 SNORA62.1-201ENST00000364287 154 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 RNU6-946P-201ENST00000383878 107 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 SNORA24.1-201ENST00000384401 135 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 MIR196B-201ENST00000384852 84 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 MIR325-201ENST00000385260 98 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 RPS4XP3-201ENST00000398541 413 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LINC01006Q8NI28 AL513331.1-201ENST00000411908 397 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LINC01006Q8NI28 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.25□□□□□ -2.05
LINC01006Q8NI28 BTF3L4P3-201ENST00000418879 476 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.25□□□□□ -2.05
LINC01006Q8NI28 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LINC01006Q8NI28 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.25□□□□□ -2.05
LINC01006Q8NI28 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.25□□□□□ -2.05
LINC01006Q8NI28 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.25□□□□□ -2.05
LINC01006Q8NI28 NEK4P1-201ENST00000433383 879 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 AC092573.2-201ENST00000434546 243 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 HIGD1AP11-201ENST00000438361 280 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 NEFMP1-201ENST00000443423 1006 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 AC079781.2-201ENST00000446424 169 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 AL590664.1-201ENST00000448065 339 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.25□□□□□ -2.05
LINC01006Q8NI28 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.25□□□□□ -2.05
LINC01006Q8NI28 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.25□□□□□ -2.05
LINC01006Q8NI28 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.25□□□□□ -2.05
LINC01006Q8NI28 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.25□□□□□ -2.05
LINC01006Q8NI28 AC013267.1-201ENST00000458227 267 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 SNORD109B-201ENST00000458961 67 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 SNORD109A-201ENST00000459128 67 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 HMGN2P13-201ENST00000476476 274 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.25□□□□□ -2.05
LINC01006Q8NI28 SNORD27.1-201ENST00000516319 72 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 Y_RNA.704-201ENST00000516851 102 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.25□□□□□ -2.05
LINC01006Q8NI28 CASP1P1-201ENST00000526345 212 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 AP001893.2-201ENST00000526949 202 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
LINC01006Q8NI28 AC079600.2-201ENST00000550076 130 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 AC002545.1-201ENST00000592511 181 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 AP001596.2-201ENST00000608410 312 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.25□□□□□ -2.05
LINC01006Q8NI28 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.25□□□□□ -2.05
LINC01006Q8NI28 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.25□□□□□ -2.05
LINC01006Q8NI28 AC139792.3-201ENST00000623525 224 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.25□□□□□ -2.05
LINC01006Q8NI28 ZNF680P1-201ENST00000436625 1469 ntBASIC2.25□□□□□ -2.05
LINC01006Q8NI28 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LINC01006Q8NI28 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LINC01006Q8NI28 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
LINC01006Q8NI28 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.24□□□□□ -2.05
LINC01006Q8NI28 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LINC01006Q8NI28 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LINC01006Q8NI28 AC004972.1-201ENST00000623934 2209 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms