Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RNU6-3P-201ENST00000384314 107 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 RNU6-16P-201ENST00000384385 107 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 RNU6-15P-201ENST00000384534 107 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 RNU6-2-201ENST00000384627 107 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 RNU6-29P-201ENST00000384637 107 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 RNU6-9-201ENST00000384776 107 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 RNU6-33P-201ENST00000384793 107 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 MIR514A1-201ENST00000385133 98 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 Y_RNA.592-201ENST00000410274 109 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 RNU6-121P-201ENST00000410525 99 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 RNU6-130P-201ENST00000411112 103 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.12□□□□□ -1.75
NUP43Q8NFH3 SNORD56-201ENST00000413522 71 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 MTCO3P19-201ENST00000415864 321 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.12□□□□□ -1.75
NUP43Q8NFH3 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.12□□□□□ -1.75
NUP43Q8NFH3 AL159987.2-201ENST00000432754 307 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.12□□□□□ -1.75
NUP43Q8NFH3 RPEP5-201ENST00000441137 268 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 RPL21P126-201ENST00000470049 478 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 IGKV2D-23-201ENST00000518179 286 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
NUP43Q8NFH3 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.12□□□□□ -1.75
NUP43Q8NFH3 AC012433.1-201ENST00000588916 398 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 RPS29P30-201ENST00000600975 111 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 RNU6-6P-201ENST00000606623 107 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 MIR7703-201ENST00000620784 77 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 AC006065.5-201ENST00000623427 349 ntBASIC4.12□□□□□ -1.75
NUP43Q8NFH3 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
NUP43Q8NFH3 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
NUP43Q8NFH3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
NUP43Q8NFH3 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
NUP43Q8NFH3 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NUP43Q8NFH3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
NUP43Q8NFH3 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NUP43Q8NFH3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
NUP43Q8NFH3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NUP43Q8NFH3 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NUP43Q8NFH3 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NUP43Q8NFH3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
NUP43Q8NFH3 RAD17P1-201ENST00000418130 2042 ntBASIC4.11□□□□□ -1.75
NUP43Q8NFH3 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
NUP43Q8NFH3 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
NUP43Q8NFH3 OR56B2P-202ENST00000641377 2453 ntBASIC4.11□□□□□ -1.75
NUP43Q8NFH3 AC007685.1-201ENST00000329806 452 ntBASIC4.11□□□□□ -1.75
NUP43Q8NFH3 SNORA70.2-201ENST00000364506 135 ntBASIC4.11□□□□□ -1.75
NUP43Q8NFH3 RNU6-708P-201ENST00000384217 107 ntBASIC4.11□□□□□ -1.75
NUP43Q8NFH3 MIR3065-201ENST00000390137 79 ntBASIC4.11□□□□□ -1.75
NUP43Q8NFH3 SNORA69.1-201ENST00000390904 137 ntBASIC4.11□□□□□ -1.75
NUP43Q8NFH3 LAP3P1-201ENST00000403648 294 ntBASIC4.11□□□□□ -1.75
NUP43Q8NFH3 RNU6-1025P-201ENST00000410629 104 ntBASIC4.11□□□□□ -1.75
NUP43Q8NFH3 RAC1P3-201ENST00000416129 580 ntBASIC4.11□□□□□ -1.75
NUP43Q8NFH3 RPL21P38-201ENST00000418090 167 ntBASIC4.11□□□□□ -1.75
NUP43Q8NFH3 AC007098.1-201ENST00000420122 367 ntBASIC4.11□□□□□ -1.75
NUP43Q8NFH3 AL158156.1-201ENST00000422509 473 ntBASIC4.11□□□□□ -1.75
NUP43Q8NFH3 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.11□□□□□ -1.75
NUP43Q8NFH3 AC091153.1-201ENST00000466297 402 ntBASIC4.11□□□□□ -1.75
NUP43Q8NFH3 TRBVB-201ENST00000477100 408 ntBASIC4.11□□□□□ -1.75
NUP43Q8NFH3 RN7SL812P-201ENST00000493791 279 ntBASIC4.11□□□□□ -1.75
NUP43Q8NFH3 RNU6-138P-201ENST00000515952 107 ntBASIC4.11□□□□□ -1.75
NUP43Q8NFH3 RNU6-111P-201ENST00000517179 105 ntBASIC4.11□□□□□ -1.75
NUP43Q8NFH3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.11□□□□□ -1.75
NUP43Q8NFH3 PARP1P2-201ENST00000556806 195 ntBASIC4.11□□□□□ -1.75
NUP43Q8NFH3 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.11□□□□□ -1.75
NUP43Q8NFH3 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.11□□□□□ -1.75
NUP43Q8NFH3 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.11□□□□□ -1.75
NUP43Q8NFH3 AC233702.9-201ENST00000581528 203 ntBASIC4.11□□□□□ -1.75
NUP43Q8NFH3 AC002545.1-201ENST00000592511 181 ntBASIC4.11□□□□□ -1.75
NUP43Q8NFH3 AP000787.2-201ENST00000604432 568 ntBASIC4.11□□□□□ -1.75
NUP43Q8NFH3 AC098479.1-201ENST00000609225 154 ntBASIC4.11□□□□□ -1.75
NUP43Q8NFH3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.11□□□□□ -1.75
NUP43Q8NFH3 MTND5P9-201ENST00000503854 1755 ntBASIC4.11□□□□□ -1.75
NUP43Q8NFH3 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
NUP43Q8NFH3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
NUP43Q8NFH3 AC010300.1-201ENST00000600671 5134 ntBASIC4.11□□□□□ -1.75
NUP43Q8NFH3 AP000560.1-201ENST00000624150 1937 ntBASIC4.11□□□□□ -1.75
NUP43Q8NFH3 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
NUP43Q8NFH3 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
NUP43Q8NFH3 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NUP43Q8NFH3 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
NUP43Q8NFH3 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NUP43Q8NFH3 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
NUP43Q8NFH3 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.1□□□□□ -1.75
NUP43Q8NFH3 RNU1-15P-201ENST00000353977 144 ntBASIC4.1□□□□□ -1.75
NUP43Q8NFH3 MIR412-201ENST00000362142 91 ntBASIC4.1□□□□□ -1.75
NUP43Q8NFH3 Y_RNA.183-201ENST00000363882 113 ntBASIC4.1□□□□□ -1.75
NUP43Q8NFH3 RNU6-827P-201ENST00000365553 106 ntBASIC4.1□□□□□ -1.75
NUP43Q8NFH3 RNU6-629P-201ENST00000384061 103 ntBASIC4.1□□□□□ -1.75
NUP43Q8NFH3 Y_RNA.478-201ENST00000384358 107 ntBASIC4.1□□□□□ -1.75
NUP43Q8NFH3 MIR521-1-201ENST00000384902 87 ntBASIC4.1□□□□□ -1.75
NUP43Q8NFH3 MIR628-201ENST00000385229 95 ntBASIC4.1□□□□□ -1.75
NUP43Q8NFH3 MIR1911-201ENST00000410783 80 ntBASIC4.1□□□□□ -1.75
NUP43Q8NFH3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.1□□□□□ -1.75
NUP43Q8NFH3 AL590135.1-201ENST00000422215 156 ntBASIC4.1□□□□□ -1.75
NUP43Q8NFH3 AC068287.1-201ENST00000430283 295 ntBASIC4.1□□□□□ -1.75
NUP43Q8NFH3 AC087650.1-201ENST00000431445 468 ntBASIC4.1□□□□□ -1.75
NUP43Q8NFH3 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.1□□□□□ -1.75
NUP43Q8NFH3 HIGD1AP2-201ENST00000446367 280 ntBASIC4.1□□□□□ -1.75
NUP43Q8NFH3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.1□□□□□ -1.75
NUP43Q8NFH3 RPS23P7-201ENST00000466210 444 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms