Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AL451062.2-201ENST00000427515 271 ntBASIC3.63□□□□□ -1.83
CPEB3Q8NE35 AC097713.2-201ENST00000430199 356 ntBASIC3.63□□□□□ -1.83
CPEB3Q8NE35 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.63□□□□□ -1.83
CPEB3Q8NE35 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.63□□□□□ -1.83
CPEB3Q8NE35 HMGB1P12-201ENST00000438594 598 ntBASIC3.63□□□□□ -1.83
CPEB3Q8NE35 AL731563.1-201ENST00000442202 214 ntBASIC3.63□□□□□ -1.83
CPEB3Q8NE35 NUTF2P3-201ENST00000448540 384 ntBASIC3.63□□□□□ -1.83
CPEB3Q8NE35 AC128713.1-201ENST00000471495 306 ntBASIC3.63□□□□□ -1.83
CPEB3Q8NE35 AC110792.1-201ENST00000491826 472 ntBASIC3.63□□□□□ -1.83
CPEB3Q8NE35 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.63□□□□□ -1.83
CPEB3Q8NE35 AC006499.6-201ENST00000511169 607 ntBASIC3.63□□□□□ -1.83
CPEB3Q8NE35 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CPEB3Q8NE35 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.63□□□□□ -1.83
CPEB3Q8NE35 MRPL49P2-201ENST00000521066 465 ntBASIC3.63□□□□□ -1.83
CPEB3Q8NE35 AP003730.1-201ENST00000524605 285 ntBASIC3.63□□□□□ -1.83
CPEB3Q8NE35 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.63□□□□□ -1.83
CPEB3Q8NE35 AC023442.1-201ENST00000531247 422 ntBASIC3.63□□□□□ -1.83
CPEB3Q8NE35 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CPEB3Q8NE35 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.63□□□□□ -1.83
CPEB3Q8NE35 AC022655.2-201ENST00000577280 318 ntBASIC3.63□□□□□ -1.83
CPEB3Q8NE35 MIR3939-201ENST00000582614 106 ntBASIC3.63□□□□□ -1.83
CPEB3Q8NE35 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CPEB3Q8NE35 AC244505.7-201ENST00000599675 272 ntBASIC3.63□□□□□ -1.83
CPEB3Q8NE35 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.63□□□□□ -1.83
CPEB3Q8NE35 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.63□□□□□ -1.83
CPEB3Q8NE35 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.63□□□□□ -1.83
CPEB3Q8NE35 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.63□□□□□ -1.83
CPEB3Q8NE35 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.63□□□□□ -1.83
CPEB3Q8NE35 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CPEB3Q8NE35 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CPEB3Q8NE35 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CPEB3Q8NE35 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CPEB3Q8NE35 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CPEB3Q8NE35 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CPEB3Q8NE35 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.62□□□□□ -1.83
CPEB3Q8NE35 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CPEB3Q8NE35 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CPEB3Q8NE35 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.62□□□□□ -1.83
CPEB3Q8NE35 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.62□□□□□ -1.83
CPEB3Q8NE35 Y_RNA.2-201ENST00000362330 96 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 Y_RNA.47-201ENST00000362697 108 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 Y_RNA.151-201ENST00000363566 112 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 Y_RNA.153-201ENST00000363615 91 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 RNU1-115P-201ENST00000365329 160 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 RNU6-629P-201ENST00000384061 103 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 MIR517A-201ENST00000385001 87 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 RNU2-3P-201ENST00000410144 191 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 RNU6-607P-201ENST00000411283 108 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 CYCSP33-201ENST00000414485 327 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 AC063979.1-201ENST00000415539 377 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.62□□□□□ -1.83
CPEB3Q8NE35 AC114482.1-201ENST00000418010 247 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 AC244098.2-201ENST00000422068 99 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.62□□□□□ -1.83
CPEB3Q8NE35 AC096644.2-201ENST00000429278 159 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 HMGB1P9-201ENST00000429856 646 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.62□□□□□ -1.83
CPEB3Q8NE35 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.62□□□□□ -1.83
CPEB3Q8NE35 RNA5SP246-201ENST00000458909 119 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 HSPE1P6-201ENST00000479457 291 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 HMGB1P30-201ENST00000492455 606 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 AC015911.1-201ENST00000495111 156 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.62□□□□□ -1.83
CPEB3Q8NE35 AC116655.1-201ENST00000508324 901 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 APOOP4-201ENST00000513530 597 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 SNORA31.9-201ENST00000516429 84 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 SNORD116.3-201ENST00000517176 78 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 AC069113.1-201ENST00000517763 267 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.62□□□□□ -1.83
CPEB3Q8NE35 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.62□□□□□ -1.83
CPEB3Q8NE35 AC110588.1-201ENST00000559699 137 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 MIR548AC-201ENST00000585049 88 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 AC104695.3-201ENST00000604052 296 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 RNU6-85P-201ENST00000605989 107 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.62□□□□□ -1.83
CPEB3Q8NE35 AC005344.1-201ENST00000613391 459 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 MIR7702-201ENST00000621931 59 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.62□□□□□ -1.83
CPEB3Q8NE35 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
CPEB3Q8NE35 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CPEB3Q8NE35 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.62□□□□□ -1.83
CPEB3Q8NE35 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CPEB3Q8NE35 CDC27P3-201ENST00000635418 1910 ntBASIC3.62□□□□□ -1.83
CPEB3Q8NE35 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.62□□□□□ -1.83
CPEB3Q8NE35 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CPEB3Q8NE35 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CPEB3Q8NE35 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CPEB3Q8NE35 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CPEB3Q8NE35 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
CPEB3Q8NE35 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.61□□□□□ -1.83
CPEB3Q8NE35 RNU6-26P-201ENST00000383985 107 ntBASIC3.61□□□□□ -1.83
CPEB3Q8NE35 Y_RNA.428-201ENST00000384078 102 ntBASIC3.61□□□□□ -1.83
CPEB3Q8NE35 Y_RNA.455-201ENST00000384230 98 ntBASIC3.61□□□□□ -1.83
CPEB3Q8NE35 SNORA41-201ENST00000384675 132 ntBASIC3.61□□□□□ -1.83
CPEB3Q8NE35 SNORD73A-201ENST00000386062 65 ntBASIC3.61□□□□□ -1.83
CPEB3Q8NE35 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CPEB3Q8NE35 RNU6-55P-201ENST00000411092 107 ntBASIC3.61□□□□□ -1.83
CPEB3Q8NE35 AL513331.1-201ENST00000411908 397 ntBASIC3.61□□□□□ -1.83
CPEB3Q8NE35 AL353621.1-201ENST00000418219 243 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms