Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 MTCYBP1-201ENST00000454315 1119 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 AC105252.1-201ENST00000503089 286 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 AC083906.5-201ENST00000503722 328 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.56□□□□□ -2
CCDC197Q8NCU1 ARL2BPP4-201ENST00000506854 471 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 MTCO3P28-201ENST00000513351 515 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 AC009902.1-201ENST00000519351 183 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.56□□□□□ -2
CCDC197Q8NCU1 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.56□□□□□ -2
CCDC197Q8NCU1 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.56□□□□□ -2
CCDC197Q8NCU1 MIR5680-201ENST00000577577 84 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 MIR3913-1-201ENST00000577744 102 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 AC024619.4-201ENST00000580924 316 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 AC040904.1-201ENST00000590850 223 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 AC024153.1-201ENST00000603103 365 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 AC007938.3-201ENST00000604965 623 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.56□□□□□ -2
CCDC197Q8NCU1 AL161734.1-201ENST00000609720 557 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.56□□□□□ -2
CCDC197Q8NCU1 UCA1.1-201ENST00000620952 75 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CCDC197Q8NCU1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
CCDC197Q8NCU1 ZNF519P1-201ENST00000449011 1626 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCDC197Q8NCU1 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCDC197Q8NCU1 NACAP2-201ENST00000318548 624 ntBASIC2.55□□□□□ -2
CCDC197Q8NCU1 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CCDC197Q8NCU1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.55□□□□□ -2
CCDC197Q8NCU1 SNORA57.1-201ENST00000391227 145 ntBASIC2.55□□□□□ -2
CCDC197Q8NCU1 RNU6-193P-201ENST00000410977 107 ntBASIC2.55□□□□□ -2
CCDC197Q8NCU1 RN7SKP263-201ENST00000411194 309 ntBASIC2.55□□□□□ -2
CCDC197Q8NCU1 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.55□□□□□ -2
CCDC197Q8NCU1 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.55□□□□□ -2
CCDC197Q8NCU1 C1DP2-201ENST00000418167 426 ntBASIC2.55□□□□□ -2
CCDC197Q8NCU1 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.55□□□□□ -2
CCDC197Q8NCU1 AL353729.1-201ENST00000425044 720 ntBASIC2.55□□□□□ -2
CCDC197Q8NCU1 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.55□□□□□ -2
CCDC197Q8NCU1 MTCO2P16-201ENST00000436962 677 ntBASIC2.55□□□□□ -2
CCDC197Q8NCU1 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.55□□□□□ -2
CCDC197Q8NCU1 RNU6-956P-201ENST00000458868 103 ntBASIC2.55□□□□□ -2
CCDC197Q8NCU1 AP000852.1-201ENST00000472460 573 ntBASIC2.55□□□□□ -2
CCDC197Q8NCU1 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.55□□□□□ -2
CCDC197Q8NCU1 AC026801.1-201ENST00000497178 464 ntBASIC2.55□□□□□ -2
CCDC197Q8NCU1 AC026427.2-201ENST00000506228 536 ntBASIC2.55□□□□□ -2
CCDC197Q8NCU1 AC010424.1-201ENST00000506336 297 ntBASIC2.55□□□□□ -2
CCDC197Q8NCU1 AC109927.2-201ENST00000506416 303 ntBASIC2.55□□□□□ -2
CCDC197Q8NCU1 AC117522.1-201ENST00000509821 380 ntBASIC2.55□□□□□ -2
CCDC197Q8NCU1 AC113155.1-201ENST00000511141 769 ntBASIC2.55□□□□□ -2
CCDC197Q8NCU1 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.55□□□□□ -2
CCDC197Q8NCU1 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCDC197Q8NCU1 Y_RNA.689-201ENST00000516589 107 ntBASIC2.55□□□□□ -2
CCDC197Q8NCU1 RN7SKP40-201ENST00000517211 242 ntBASIC2.55□□□□□ -2
CCDC197Q8NCU1 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.55□□□□□ -2
CCDC197Q8NCU1 AC087883.1-201ENST00000551882 391 ntBASIC2.55□□□□□ -2
CCDC197Q8NCU1 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.55□□□□□ -2
CCDC197Q8NCU1 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.55□□□□□ -2
CCDC197Q8NCU1 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.55□□□□□ -2
CCDC197Q8NCU1 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.55□□□□□ -2
CCDC197Q8NCU1 RSL24D1P11-201ENST00000591045 491 ntBASIC2.55□□□□□ -2
CCDC197Q8NCU1 AC245389.1-201ENST00000605141 529 ntBASIC2.55□□□□□ -2
CCDC197Q8NCU1 AL121992.2-201ENST00000606262 256 ntBASIC2.55□□□□□ -2
CCDC197Q8NCU1 MIR15A-201ENST00000607334 83 ntBASIC2.55□□□□□ -2
CCDC197Q8NCU1 AC109347.2-201ENST00000610220 349 ntBASIC2.55□□□□□ -2
CCDC197Q8NCU1 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CCDC197Q8NCU1 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC2.55□□□□□ -2
CCDC197Q8NCU1 AC026422.1-201ENST00000623961 452 ntBASIC2.55□□□□□ -2
CCDC197Q8NCU1 CU459211.1-201ENST00000635667 749 ntBASIC2.55□□□□□ -2
CCDC197Q8NCU1 AL512643.1-201ENST00000635735 524 ntBASIC2.55□□□□□ -2
CCDC197Q8NCU1 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.55□□□□□ -2
CCDC197Q8NCU1 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
CCDC197Q8NCU1 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC197Q8NCU1 AL390237.1-201ENST00000404226 1415 ntBASIC2.54□□□□□ -2
CCDC197Q8NCU1 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.54□□□□□ -2
CCDC197Q8NCU1 AC005336.3-201ENST00000623833 2679 ntBASIC2.54□□□□□ -2
CCDC197Q8NCU1 SNORA4.3-201ENST00000365564 137 ntBASIC2.54□□□□□ -2
CCDC197Q8NCU1 RNU6-641P-201ENST00000384006 107 ntBASIC2.54□□□□□ -2
CCDC197Q8NCU1 SNORA24.1-201ENST00000384401 135 ntBASIC2.54□□□□□ -2
CCDC197Q8NCU1 Y_RNA.553-201ENST00000384670 102 ntBASIC2.54□□□□□ -2
CCDC197Q8NCU1 MIR627-201ENST00000384979 97 ntBASIC2.54□□□□□ -2
CCDC197Q8NCU1 RNU2-49P-201ENST00000410666 184 ntBASIC2.54□□□□□ -2
CCDC197Q8NCU1 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.54□□□□□ -2
CCDC197Q8NCU1 AC080125.1-201ENST00000414888 684 ntBASIC2.54□□□□□ -2
CCDC197Q8NCU1 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.54□□□□□ -2
CCDC197Q8NCU1 USP9YP20-201ENST00000419224 558 ntBASIC2.54□□□□□ -2
CCDC197Q8NCU1 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.54□□□□□ -2
CCDC197Q8NCU1 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.54□□□□□ -2
CCDC197Q8NCU1 AC022018.1-201ENST00000430685 241 ntBASIC2.54□□□□□ -2
CCDC197Q8NCU1 KATNBL1P3-201ENST00000443475 909 ntBASIC2.54□□□□□ -2
CCDC197Q8NCU1 MTATP6P26-201ENST00000445926 662 ntBASIC2.54□□□□□ -2
CCDC197Q8NCU1 AL360221.1-201ENST00000445989 335 ntBASIC2.54□□□□□ -2
CCDC197Q8NCU1 AC108078.2-201ENST00000510750 236 ntBASIC2.54□□□□□ -2
CCDC197Q8NCU1 AC022447.1-201ENST00000515358 464 ntBASIC2.54□□□□□ -2
CCDC197Q8NCU1 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.54□□□□□ -2
CCDC197Q8NCU1 RPPH1-2P-201ENST00000516688 293 ntBASIC2.54□□□□□ -2
CCDC197Q8NCU1 RNU6-143P-201ENST00000516942 93 ntBASIC2.54□□□□□ -2
CCDC197Q8NCU1 RNU6-1315P-201ENST00000517187 99 ntBASIC2.54□□□□□ -2
CCDC197Q8NCU1 PSMA2P1-201ENST00000526365 646 ntBASIC2.54□□□□□ -2
CCDC197Q8NCU1 AP000873.5-201ENST00000533906 236 ntBASIC2.54□□□□□ -2
CCDC197Q8NCU1 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.54□□□□□ -2
CCDC197Q8NCU1 NACAP3-201ENST00000552100 481 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms