Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 BMI1P1-201ENST00000445879 941 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 AC021382.1-201ENST00000483523 359 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 OR5BM1P-201ENST00000512021 366 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 RN7SKP258-201ENST00000517151 304 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 ACTR3BP3-201ENST00000565577 979 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 MIR3670-2-201ENST00000582974 65 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 MIR3670-1-201ENST00000584160 65 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 MIR3670-3-201ENST00000584855 65 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 AC008739.2-201ENST00000597006 317 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 MIR3670-4-201ENST00000612260 65 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 AC068831.7-201ENST00000616954 363 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 AP002791.1-201ENST00000623291 381 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 AC010297.1-201ENST00000623948 149 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 ELL2P3-201ENST00000457883 1602 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 SNORA26.9-201ENST00000391322 122 ntBASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 AL031577.2-201ENST00000404133 280 ntBASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 AC078974.1-201ENST00000411597 223 ntBASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 TPMTP3-201ENST00000411928 735 ntBASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 RPL17P12-201ENST00000413391 526 ntBASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 AL365184.2-201ENST00000431139 435 ntBASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 HMGB1P27-201ENST00000431429 603 ntBASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 PGBD4P3-201ENST00000440731 581 ntBASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 ART2BP-201ENST00000453501 499 ntBASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 ARPC3P2-201ENST00000457786 533 ntBASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 AL049714.1-201ENST00000466686 347 ntBASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 AC233702.1-201ENST00000482905 502 ntBASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 RPL23AP41-201ENST00000484754 458 ntBASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 AC055855.1-201ENST00000489563 579 ntBASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 AC010486.3-201ENST00000511602 785 ntBASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 SCARNA17.1-201ENST00000516211 143 ntBASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 SCARNA17.2-201ENST00000516334 143 ntBASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 MTND2P38-201ENST00000522536 667 ntBASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 AP000889.2-201ENST00000532684 490 ntBASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 MIR4255-201ENST00000579351 72 ntBASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 AC008088.1-201ENST00000580993 280 ntBASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 AC007038.2-201ENST00000608095 740 ntBASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 AC013562.2-201ENST00000611632 603 ntBASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 SCARNA17.4-201ENST00000614296 143 ntBASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 MIR6132-201ENST00000622083 109 ntBASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 MTND1P37-201ENST00000636562 264 ntBASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
COL27A1Q8IZC6 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.1
COL27A1Q8IZC6 RNY3P13-201ENST00000365542 102 ntBASIC1.9□□□□□ -2.1
COL27A1Q8IZC6 MT-TH-201ENST00000387441 69 ntBASIC1.9□□□□□ -2.1
COL27A1Q8IZC6 SNORA40.18-201ENST00000391200 128 ntBASIC1.9□□□□□ -2.1
COL27A1Q8IZC6 CCNG1P1-201ENST00000406783 885 ntBASIC1.9□□□□□ -2.1
COL27A1Q8IZC6 Y_RNA.598-201ENST00000410480 95 ntBASIC1.9□□□□□ -2.1
COL27A1Q8IZC6 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.9□□□□□ -2.1
COL27A1Q8IZC6 AL356583.2-201ENST00000426536 280 ntBASIC1.9□□□□□ -2.1
COL27A1Q8IZC6 DPPA2P1-201ENST00000428060 556 ntBASIC1.9□□□□□ -2.1
COL27A1Q8IZC6 ARPC3P1-201ENST00000437218 533 ntBASIC1.9□□□□□ -2.1
COL27A1Q8IZC6 LARP1BP3-201ENST00000437229 869 ntBASIC1.9□□□□□ -2.1
COL27A1Q8IZC6 AC233279.1-201ENST00000455300 423 ntBASIC1.9□□□□□ -2.1
COL27A1Q8IZC6 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
COL27A1Q8IZC6 AC109464.2-201ENST00000510242 943 ntBASIC1.9□□□□□ -2.1
COL27A1Q8IZC6 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.9□□□□□ -2.1
COL27A1Q8IZC6 RNA5SP290-201ENST00000517133 127 ntBASIC1.9□□□□□ -2.1
COL27A1Q8IZC6 RNU6-232P-201ENST00000517144 64 ntBASIC1.9□□□□□ -2.1
COL27A1Q8IZC6 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC1.9□□□□□ -2.1
COL27A1Q8IZC6 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC1.9□□□□□ -2.1
COL27A1Q8IZC6 MIR4498-201ENST00000577599 66 ntBASIC1.9□□□□□ -2.1
COL27A1Q8IZC6 MIR5697-201ENST00000578045 78 ntBASIC1.9□□□□□ -2.1
COL27A1Q8IZC6 AL161729.4-201ENST00000604650 476 ntBASIC1.9□□□□□ -2.1
COL27A1Q8IZC6 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
COL27A1Q8IZC6 AL031775.1-201ENST00000607014 887 ntBASIC1.9□□□□□ -2.1
COL27A1Q8IZC6 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.9□□□□□ -2.1
COL27A1Q8IZC6 AL359198.2-201ENST00000611836 194 ntBASIC1.9□□□□□ -2.1
COL27A1Q8IZC6 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.9□□□□□ -2.1
COL27A1Q8IZC6 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.9□□□□□ -2.1
COL27A1Q8IZC6 AC120349.3-201ENST00000624377 529 ntBASIC1.9□□□□□ -2.1
COL27A1Q8IZC6 MIR3974-201ENST00000637126 96 ntBASIC1.9□□□□□ -2.1
COL27A1Q8IZC6 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.9□□□□□ -2.11
COL27A1Q8IZC6 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
COL27A1Q8IZC6 RNU6-433P-201ENST00000363216 104 ntBASIC1.9□□□□□ -2.11
COL27A1Q8IZC6 RNU6-853P-201ENST00000364306 107 ntBASIC1.9□□□□□ -2.11
COL27A1Q8IZC6 RNU6-321P-201ENST00000410912 106 ntBASIC1.9□□□□□ -2.11
COL27A1Q8IZC6 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.9□□□□□ -2.11
COL27A1Q8IZC6 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.9□□□□□ -2.11
COL27A1Q8IZC6 AC090960.1-201ENST00000421072 306 ntBASIC1.9□□□□□ -2.11
COL27A1Q8IZC6 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms