Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC091965.5-201ENST00000624785 342 ntBASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CCDC65Q8IXS2 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 Y_RNA.302-201ENST00000364997 102 ntBASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 Y_RNA.500-201ENST00000384466 111 ntBASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 RNU6-14P-201ENST00000384630 106 ntBASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 AL445529.1-201ENST00000398713 389 ntBASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 NPM1P11-201ENST00000417106 855 ntBASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 VPS26BP1-201ENST00000417155 755 ntBASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 AL022400.1-201ENST00000423946 935 ntBASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 SRIP2-201ENST00000428470 166 ntBASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 AL606517.1-201ENST00000446914 387 ntBASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 Z73417.1-201ENST00000447373 778 ntBASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 SNORD11.1-201ENST00000459482 85 ntBASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 RPS27AP10-201ENST00000496103 208 ntBASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 AC034244.1-201ENST00000507687 207 ntBASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 CYCSP26-201ENST00000534107 320 ntBASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 AC093012.1-202ENST00000549403 582 ntBASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 MIR4307-201ENST00000582802 84 ntBASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 AL161798.1-201ENST00000604630 131 ntBASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 AC091965.4-201ENST00000607691 587 ntBASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 AC008498.1-201ENST00000613012 531 ntBASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 AC068057.2-201ENST00000624047 895 ntBASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 MTND4P1-201ENST00000457501 1466 ntBASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 ELF2P3-201ENST00000445099 1506 ntBASIC2.36□□□□□ -2.03
CCDC65Q8IXS2 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 Y_RNA.97-201ENST00000363094 102 ntBASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 RNU6-1167P-201ENST00000363227 94 ntBASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 RNU4-28P-201ENST00000364739 141 ntBASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 RNU6-1328P-201ENST00000410938 106 ntBASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 RPL22P18-201ENST00000417197 377 ntBASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 MYL8P-204ENST00000431574 518 ntBASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 ANKRD26P4-201ENST00000455755 950 ntBASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 RPF2P2-201ENST00000504693 896 ntBASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 SCARNA17.1-201ENST00000516211 143 ntBASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 RNU6-415P-201ENST00000516252 97 ntBASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 SCARNA17.2-201ENST00000516334 143 ntBASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 RNA5SP290-201ENST00000517133 127 ntBASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 MIR4435-1-201ENST00000582552 80 ntBASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 MIR5002-201ENST00000584713 97 ntBASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 AC098826.3-201ENST00000603823 466 ntBASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 AL031281.1-201ENST00000604049 488 ntBASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 AC107214.2-201ENST00000608204 634 ntBASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 SCARNA17.4-201ENST00000614296 143 ntBASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 AL590808.1-201ENST00000618696 141 ntBASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
CCDC65Q8IXS2 SNORA46.1-201ENST00000391069 153 ntBASIC2.34□□□□□ -2.03
CCDC65Q8IXS2 RNU2-40P-201ENST00000410833 196 ntBASIC2.34□□□□□ -2.03
CCDC65Q8IXS2 RNA5SP508-201ENST00000411327 119 ntBASIC2.34□□□□□ -2.03
CCDC65Q8IXS2 BTF3L4P3-201ENST00000418879 476 ntBASIC2.34□□□□□ -2.03
CCDC65Q8IXS2 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.34□□□□□ -2.03
CCDC65Q8IXS2 ISCA1P1-201ENST00000426679 387 ntBASIC2.34□□□□□ -2.03
CCDC65Q8IXS2 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC65Q8IXS2 RPS15AP5-201ENST00000436276 388 ntBASIC2.34□□□□□ -2.03
CCDC65Q8IXS2 AL591719.1-201ENST00000444669 744 ntBASIC2.34□□□□□ -2.03
CCDC65Q8IXS2 PSPHP1-201ENST00000450062 261 ntBASIC2.34□□□□□ -2.03
CCDC65Q8IXS2 FABP5P15-201ENST00000453566 214 ntBASIC2.34□□□□□ -2.03
CCDC65Q8IXS2 RPL26P9-201ENST00000457466 433 ntBASIC2.34□□□□□ -2.03
CCDC65Q8IXS2 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.03
CCDC65Q8IXS2 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC65Q8IXS2 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC65Q8IXS2 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.34□□□□□ -2.03
CCDC65Q8IXS2 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.34□□□□□ -2.03
CCDC65Q8IXS2 DEFB108A-201ENST00000530110 222 ntBASIC2.34□□□□□ -2.03
CCDC65Q8IXS2 AP000907.2-201ENST00000530827 353 ntBASIC2.34□□□□□ -2.03
CCDC65Q8IXS2 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC65Q8IXS2 AL354943.1-201ENST00000572103 781 ntBASIC2.34□□□□□ -2.03
CCDC65Q8IXS2 MIR1273D-201ENST00000577266 86 ntBASIC2.34□□□□□ -2.03
CCDC65Q8IXS2 AC005498.1-201ENST00000592125 465 ntBASIC2.34□□□□□ -2.03
CCDC65Q8IXS2 AC068790.3-201ENST00000602988 553 ntBASIC2.34□□□□□ -2.03
CCDC65Q8IXS2 APOOP1-201ENST00000604695 592 ntBASIC2.34□□□□□ -2.03
CCDC65Q8IXS2 AC135507.1-201ENST00000607214 561 ntBASIC2.34□□□□□ -2.03
CCDC65Q8IXS2 AC108747.1-201ENST00000609508 535 ntBASIC2.34□□□□□ -2.03
CCDC65Q8IXS2 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms