Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 RN7SL738P-201ENST00000470264 297 ntBASIC3.69□□□□□ -1.82
LYSMD2Q8IV50 PPIAP15-201ENST00000479662 484 ntBASIC3.69□□□□□ -1.82
LYSMD2Q8IV50 AC068781.1-201ENST00000488231 618 ntBASIC3.69□□□□□ -1.82
LYSMD2Q8IV50 ATP5LP3-201ENST00000514223 304 ntBASIC3.69□□□□□ -1.82
LYSMD2Q8IV50 SNORA25.10-201ENST00000515926 124 ntBASIC3.69□□□□□ -1.82
LYSMD2Q8IV50 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.69□□□□□ -1.82
LYSMD2Q8IV50 RN7SKP295-201ENST00000517264 153 ntBASIC3.69□□□□□ -1.82
LYSMD2Q8IV50 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LYSMD2Q8IV50 AC011602.1-201ENST00000546484 331 ntBASIC3.69□□□□□ -1.82
LYSMD2Q8IV50 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.69□□□□□ -1.82
LYSMD2Q8IV50 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.69□□□□□ -1.82
LYSMD2Q8IV50 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.69□□□□□ -1.82
LYSMD2Q8IV50 AL161629.2-201ENST00000615347 275 ntBASIC3.69□□□□□ -1.82
LYSMD2Q8IV50 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
LYSMD2Q8IV50 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
LYSMD2Q8IV50 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 AF117829.1-206ENST00000621883 3802 ntBASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 Y_RNA.216-201ENST00000364205 93 ntBASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 RNU6-827P-201ENST00000365553 106 ntBASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 Y_RNA.463-201ENST00000384271 102 ntBASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 RNU6-171P-201ENST00000384354 107 ntBASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 RNU6-1035P-201ENST00000384477 107 ntBASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 NDUFS5P4-201ENST00000412983 318 ntBASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 YPEL5P1-201ENST00000419731 367 ntBASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 AC018865.2-201ENST00000423631 129 ntBASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 RPS12P10-201ENST00000427031 377 ntBASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 AC007389.2-201ENST00000434630 306 ntBASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 AC011816.1-201ENST00000441346 546 ntBASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 FTH1P25-201ENST00000447665 469 ntBASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 AC073850.1-201ENST00000449243 255 ntBASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 AC103987.1-201ENST00000473394 348 ntBASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 AL135752.1-201ENST00000479477 471 ntBASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 AK3P2-201ENST00000507976 429 ntBASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 Y_RNA.661-201ENST00000516003 99 ntBASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 RNU1-103P-201ENST00000516502 125 ntBASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 SNORD116.3-201ENST00000517176 78 ntBASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 CPDP1-201ENST00000579660 283 ntBASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 uc_338.32-201ENST00000615087 172 ntBASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 AC006971.1-201ENST00000407916 4486 ntBASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.68□□□□□ -1.82
LYSMD2Q8IV50 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 INTS6P1-201ENST00000504674 2530 ntBASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 AC007685.1-201ENST00000329806 452 ntBASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 Y_RNA.5-201ENST00000362334 102 ntBASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 Y_RNA.31-201ENST00000362574 102 ntBASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 SNORA63C-201ENST00000364578 129 ntBASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 Y_RNA.473-201ENST00000384333 102 ntBASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 RNU6-658P-201ENST00000384606 106 ntBASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 RNU6-331P-201ENST00000384724 107 ntBASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 AL591034.1-201ENST00000407447 340 ntBASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 U3.37-201ENST00000408528 213 ntBASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 MIR1282-201ENST00000408865 101 ntBASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 RNA5SP113-201ENST00000410486 84 ntBASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 RNU6-55P-201ENST00000411092 107 ntBASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 SNRPEP4-201ENST00000435815 279 ntBASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 AC099799.1-201ENST00000439809 192 ntBASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 HIGD1AP2-201ENST00000446367 280 ntBASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 BTF3P15-201ENST00000455606 336 ntBASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 HMGN1P10-201ENST00000474557 553 ntBASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 RPL7P51-201ENST00000490532 749 ntBASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 AC022493.2-201ENST00000506122 481 ntBASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 SCARNA16.2-201ENST00000516520 172 ntBASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 AC006064.5-201ENST00000541782 248 ntBASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 AC009314.1-201ENST00000603871 304 ntBASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 MIR6853-201ENST00000619642 74 ntBASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 AP002799.1-201ENST00000623552 423 ntBASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.67□□□□□ -1.82
LYSMD2Q8IV50 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms