Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.82□□□□□ -2.28
UBR3Q6ZT12 RNU5F-8P-201ENST00000515941 111 ntBASIC0.82□□□□□ -2.28
UBR3Q6ZT12 RNU6-496P-201ENST00000516145 99 ntBASIC0.82□□□□□ -2.28
UBR3Q6ZT12 Y_RNA.681-201ENST00000516445 113 ntBASIC0.82□□□□□ -2.28
UBR3Q6ZT12 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC0.82□□□□□ -2.28
UBR3Q6ZT12 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.82□□□□□ -2.28
UBR3Q6ZT12 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC0.82□□□□□ -2.28
UBR3Q6ZT12 NIFKP8-201ENST00000560500 874 ntBASIC0.82□□□□□ -2.28
UBR3Q6ZT12 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.82□□□□□ -2.28
UBR3Q6ZT12 AC013244.2-201ENST00000603396 103 ntBASIC0.82□□□□□ -2.28
UBR3Q6ZT12 AL360085.1-201ENST00000604713 532 ntBASIC0.82□□□□□ -2.28
UBR3Q6ZT12 AC243829.3-201ENST00000622177 108 ntBASIC0.82□□□□□ -2.28
UBR3Q6ZT12 AL049737.1-201ENST00000413920 1403 ntBASIC0.82□□□□□ -2.28
UBR3Q6ZT12 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
UBR3Q6ZT12 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
UBR3Q6ZT12 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.81□□□□□ -2.28
UBR3Q6ZT12 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC0.81□□□□□ -2.28
UBR3Q6ZT12 RNA5SP476-201ENST00000516613 103 ntBASIC0.81□□□□□ -2.28
UBR3Q6ZT12 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.81□□□□□ -2.28
UBR3Q6ZT12 AC006270.3-201ENST00000605967 1036 ntBASIC0.81□□□□□ -2.28
UBR3Q6ZT12 AC243829.6-201ENST00000612652 106 ntBASIC0.81□□□□□ -2.28
UBR3Q6ZT12 DUSP12P1-201ENST00000612874 516 ntBASIC0.81□□□□□ -2.28
UBR3Q6ZT12 AL109933.3-201ENST00000619095 188 ntBASIC0.81□□□□□ -2.28
UBR3Q6ZT12 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.81□□□□□ -2.28
UBR3Q6ZT12 AL513185.3-201ENST00000433335 1300 ntBASIC0.8□□□□□ -2.28
UBR3Q6ZT12 RNU6-492P-201ENST00000363035 104 ntBASIC0.8□□□□□ -2.28
UBR3Q6ZT12 AC099677.1-201ENST00000420575 175 ntBASIC0.8□□□□□ -2.28
UBR3Q6ZT12 MRPL35P3-201ENST00000421557 364 ntBASIC0.8□□□□□ -2.28
UBR3Q6ZT12 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.8□□□□□ -2.28
UBR3Q6ZT12 RPL7L1P10-201ENST00000427790 463 ntBASIC0.8□□□□□ -2.28
UBR3Q6ZT12 HSPE1P21-201ENST00000438283 308 ntBASIC0.8□□□□□ -2.28
UBR3Q6ZT12 TPTE2P6-202ENST00000445572 1007 ntBASIC0.8□□□□□ -2.28
UBR3Q6ZT12 MTCYBP3-201ENST00000445588 1137 ntBASIC0.8□□□□□ -2.28
UBR3Q6ZT12 SUMO2P2-201ENST00000456482 255 ntBASIC0.8□□□□□ -2.28
UBR3Q6ZT12 CYCSP23-201ENST00000519781 313 ntBASIC0.8□□□□□ -2.28
UBR3Q6ZT12 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.8□□□□□ -2.28
UBR3Q6ZT12 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.8□□□□□ -2.28
UBR3Q6ZT12 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.8□□□□□ -2.28
UBR3Q6ZT12 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC0.8□□□□□ -2.28
UBR3Q6ZT12 AP003476.1-201ENST00000623984 516 ntBASIC0.8□□□□□ -2.28
UBR3Q6ZT12 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
UBR3Q6ZT12 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
UBR3Q6ZT12 RN7SKP61-201ENST00000410642 295 ntBASIC0.8□□□□□ -2.28
UBR3Q6ZT12 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC0.8□□□□□ -2.28
UBR3Q6ZT12 HMGB1P9-201ENST00000429856 646 ntBASIC0.8□□□□□ -2.28
UBR3Q6ZT12 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC0.8□□□□□ -2.28
UBR3Q6ZT12 AL161651.1-201ENST00000440882 223 ntBASIC0.8□□□□□ -2.28
UBR3Q6ZT12 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.8□□□□□ -2.28
UBR3Q6ZT12 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
UBR3Q6ZT12 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.8□□□□□ -2.28
UBR3Q6ZT12 AC098862.1-201ENST00000504991 413 ntBASIC0.8□□□□□ -2.28
UBR3Q6ZT12 SNORA70.16-201ENST00000516390 95 ntBASIC0.8□□□□□ -2.28
UBR3Q6ZT12 SNORA31.13-201ENST00000516624 135 ntBASIC0.8□□□□□ -2.28
UBR3Q6ZT12 RNU6-362P-201ENST00000516736 90 ntBASIC0.8□□□□□ -2.28
UBR3Q6ZT12 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.8□□□□□ -2.28
UBR3Q6ZT12 AC104229.1-201ENST00000561364 255 ntBASIC0.8□□□□□ -2.28
UBR3Q6ZT12 RMST_5.1-201ENST00000618704 126 ntBASIC0.8□□□□□ -2.28
UBR3Q6ZT12 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.79□□□□□ -2.28
UBR3Q6ZT12 RNU6-939P-201ENST00000384634 107 ntBASIC0.79□□□□□ -2.28
UBR3Q6ZT12 RPL23AP32-201ENST00000395315 459 ntBASIC0.79□□□□□ -2.28
UBR3Q6ZT12 RNA5SP511-201ENST00000410487 115 ntBASIC0.79□□□□□ -2.28
UBR3Q6ZT12 RPL39P29-201ENST00000447779 157 ntBASIC0.79□□□□□ -2.28
UBR3Q6ZT12 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC0.79□□□□□ -2.28
UBR3Q6ZT12 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.79□□□□□ -2.28
UBR3Q6ZT12 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.79□□□□□ -2.28
UBR3Q6ZT12 ELL2P3-201ENST00000457883 1602 ntBASIC0.78□□□□□ -2.28
UBR3Q6ZT12 SNORA25.8-201ENST00000364831 128 ntBASIC0.78□□□□□ -2.28
UBR3Q6ZT12 BTF3L4P2-201ENST00000392798 346 ntBASIC0.78□□□□□ -2.28
UBR3Q6ZT12 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.78□□□□□ -2.28
UBR3Q6ZT12 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.78□□□□□ -2.28
UBR3Q6ZT12 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.78□□□□□ -2.28
UBR3Q6ZT12 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
UBR3Q6ZT12 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.78□□□□□ -2.28
UBR3Q6ZT12 AP003484.1-201ENST00000530974 250 ntBASIC0.78□□□□□ -2.28
UBR3Q6ZT12 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.78□□□□□ -2.28
UBR3Q6ZT12 AC010186.2-204ENST00000537668 439 ntBASIC0.78□□□□□ -2.28
UBR3Q6ZT12 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
UBR3Q6ZT12 RNU6-173P-201ENST00000364215 104 ntBASIC0.78□□□□□ -2.29
UBR3Q6ZT12 U3.13-201ENST00000364804 214 ntBASIC0.78□□□□□ -2.29
UBR3Q6ZT12 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
UBR3Q6ZT12 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.78□□□□□ -2.29
UBR3Q6ZT12 RNU4-78P-201ENST00000410940 126 ntBASIC0.78□□□□□ -2.29
UBR3Q6ZT12 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.78□□□□□ -2.29
UBR3Q6ZT12 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.78□□□□□ -2.29
UBR3Q6ZT12 RNA5SP121-201ENST00000516537 101 ntBASIC0.78□□□□□ -2.29
UBR3Q6ZT12 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.78□□□□□ -2.29
UBR3Q6ZT12 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.78□□□□□ -2.29
UBR3Q6ZT12 AC022254.1-201ENST00000567857 235 ntBASIC0.78□□□□□ -2.29
UBR3Q6ZT12 DUXAP11-201ENST00000603858 526 ntBASIC0.78□□□□□ -2.29
UBR3Q6ZT12 AC016925.2-201ENST00000605108 242 ntBASIC0.78□□□□□ -2.29
UBR3Q6ZT12 Y_RNA.85-201ENST00000363014 111 ntBASIC0.77□□□□□ -2.29
UBR3Q6ZT12 RNA5SP212-201ENST00000391223 107 ntBASIC0.77□□□□□ -2.29
UBR3Q6ZT12 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
UBR3Q6ZT12 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.77□□□□□ -2.29
UBR3Q6ZT12 AC090888.1-201ENST00000561335 1141 ntBASIC0.77□□□□□ -2.29
UBR3Q6ZT12 AP001485.1-201ENST00000604799 199 ntBASIC0.77□□□□□ -2.29
UBR3Q6ZT12 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.77□□□□□ -2.29
UBR3Q6ZT12 AP006248.3-201ENST00000623580 594 ntBASIC0.77□□□□□ -2.29
UBR3Q6ZT12 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
UBR3Q6ZT12 HSBP1P2-201ENST00000299671 229 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms