Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.27□□□□□ -2.21
CCDC171Q6TFL3 NDUFA5P4-201ENST00000436704 385 ntBASIC1.27□□□□□ -2.21
CCDC171Q6TFL3 RPL26P6-201ENST00000440913 438 ntBASIC1.27□□□□□ -2.21
CCDC171Q6TFL3 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.27□□□□□ -2.21
CCDC171Q6TFL3 AP1S2P1-201ENST00000457344 379 ntBASIC1.27□□□□□ -2.21
CCDC171Q6TFL3 AC087343.1-201ENST00000477341 475 ntBASIC1.27□□□□□ -2.21
CCDC171Q6TFL3 ATP5EP1-201ENST00000510257 156 ntBASIC1.27□□□□□ -2.21
CCDC171Q6TFL3 AC107953.1-201ENST00000522216 297 ntBASIC1.27□□□□□ -2.21
CCDC171Q6TFL3 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.27□□□□□ -2.21
CCDC171Q6TFL3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.27□□□□□ -2.21
CCDC171Q6TFL3 MIR4452-201ENST00000583004 71 ntBASIC1.27□□□□□ -2.21
CCDC171Q6TFL3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.27□□□□□ -2.21
CCDC171Q6TFL3 AP000403.1-201ENST00000603349 851 ntBASIC1.27□□□□□ -2.21
CCDC171Q6TFL3 MTND5P30-201ENST00000452896 1731 ntBASIC1.27□□□□□ -2.21
CCDC171Q6TFL3 MIR96-201ENST00000362288 78 ntBASIC1.26□□□□□ -2.21
CCDC171Q6TFL3 SNORD114-27-201ENST00000363766 70 ntBASIC1.26□□□□□ -2.21
CCDC171Q6TFL3 RNU2-43P-201ENST00000410306 190 ntBASIC1.26□□□□□ -2.21
CCDC171Q6TFL3 SNRPEP10-201ENST00000420249 274 ntBASIC1.26□□□□□ -2.21
CCDC171Q6TFL3 MRPL35P3-201ENST00000421557 364 ntBASIC1.26□□□□□ -2.21
CCDC171Q6TFL3 AL590233.1-201ENST00000430017 456 ntBASIC1.26□□□□□ -2.21
CCDC171Q6TFL3 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.26□□□□□ -2.21
CCDC171Q6TFL3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.26□□□□□ -2.21
CCDC171Q6TFL3 AC092757.1-201ENST00000467293 467 ntBASIC1.26□□□□□ -2.21
CCDC171Q6TFL3 AC093767.1-201ENST00000504523 156 ntBASIC1.26□□□□□ -2.21
CCDC171Q6TFL3 AC113420.1-201ENST00000507903 571 ntBASIC1.26□□□□□ -2.21
CCDC171Q6TFL3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.26□□□□□ -2.21
CCDC171Q6TFL3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.26□□□□□ -2.21
CCDC171Q6TFL3 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.26□□□□□ -2.21
CCDC171Q6TFL3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.26□□□□□ -2.21
CCDC171Q6TFL3 MIR4295-201ENST00000585286 85 ntBASIC1.26□□□□□ -2.21
CCDC171Q6TFL3 AL161729.4-201ENST00000604650 476 ntBASIC1.26□□□□□ -2.21
CCDC171Q6TFL3 SNORD114-21-201ENST00000606412 72 ntBASIC1.26□□□□□ -2.21
CCDC171Q6TFL3 AC103810.9-201ENST00000606688 112 ntBASIC1.26□□□□□ -2.21
CCDC171Q6TFL3 AC092140.2-201ENST00000618027 521 ntBASIC1.26□□□□□ -2.21
CCDC171Q6TFL3 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
CCDC171Q6TFL3 AC087821.2-201ENST00000637086 450 ntBASIC1.26□□□□□ -2.21
CCDC171Q6TFL3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.26□□□□□ -2.21
CCDC171Q6TFL3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.26□□□□□ -2.21
CCDC171Q6TFL3 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.25□□□□□ -2.21
CCDC171Q6TFL3 Y_RNA.118-201ENST00000363300 101 ntBASIC1.25□□□□□ -2.21
CCDC171Q6TFL3 SNORA40.19-201ENST00000390846 128 ntBASIC1.25□□□□□ -2.21
CCDC171Q6TFL3 HMGB1P17-201ENST00000403495 628 ntBASIC1.25□□□□□ -2.21
CCDC171Q6TFL3 RPS24P7-201ENST00000416921 246 ntBASIC1.25□□□□□ -2.21
CCDC171Q6TFL3 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.25□□□□□ -2.21
CCDC171Q6TFL3 AC007742.1-201ENST00000425789 329 ntBASIC1.25□□□□□ -2.21
CCDC171Q6TFL3 AC092648.1-201ENST00000425870 423 ntBASIC1.25□□□□□ -2.21
CCDC171Q6TFL3 ELOCP26-201ENST00000436067 329 ntBASIC1.25□□□□□ -2.21
CCDC171Q6TFL3 AC092393.1-201ENST00000439625 742 ntBASIC1.25□□□□□ -2.21
CCDC171Q6TFL3 CALM1P1-201ENST00000442082 433 ntBASIC1.25□□□□□ -2.21
CCDC171Q6TFL3 HMGB1P35-201ENST00000503360 598 ntBASIC1.25□□□□□ -2.21
CCDC171Q6TFL3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.25□□□□□ -2.21
CCDC171Q6TFL3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.25□□□□□ -2.21
CCDC171Q6TFL3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
CCDC171Q6TFL3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.25□□□□□ -2.21
CCDC171Q6TFL3 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.25□□□□□ -2.21
CCDC171Q6TFL3 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.25□□□□□ -2.21
CCDC171Q6TFL3 AC027104.1-201ENST00000563702 681 ntBASIC1.25□□□□□ -2.21
CCDC171Q6TFL3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.25□□□□□ -2.21
CCDC171Q6TFL3 AC136443.5-201ENST00000603741 370 ntBASIC1.25□□□□□ -2.21
CCDC171Q6TFL3 AL138478.1-201ENST00000612252 832 ntBASIC1.25□□□□□ -2.21
CCDC171Q6TFL3 FRG1HP-204ENST00000617940 757 ntBASIC1.25□□□□□ -2.21
CCDC171Q6TFL3 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC1.25□□□□□ -2.21
CCDC171Q6TFL3 AC008443.7-201ENST00000622195 246 ntBASIC1.25□□□□□ -2.21
CCDC171Q6TFL3 AC119674.1-220ENST00000641502 1048 ntBASIC1.25□□□□□ -2.21
CCDC171Q6TFL3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.25□□□□□ -2.21
CCDC171Q6TFL3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
CCDC171Q6TFL3 SNORD114-22-201ENST00000365423 72 ntBASIC1.24□□□□□ -2.21
CCDC171Q6TFL3 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CCDC171Q6TFL3 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.24□□□□□ -2.21
CCDC171Q6TFL3 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC1.24□□□□□ -2.21
CCDC171Q6TFL3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.24□□□□□ -2.21
CCDC171Q6TFL3 GDI2P2-201ENST00000445131 608 ntBASIC1.24□□□□□ -2.21
CCDC171Q6TFL3 COX6CP18-201ENST00000448769 222 ntBASIC1.24□□□□□ -2.21
CCDC171Q6TFL3 AC008379.1-201ENST00000463655 464 ntBASIC1.24□□□□□ -2.21
CCDC171Q6TFL3 SSR3-208ENST00000496050 579 ntTSL 4 BASIC1.24□□□□□ -2.21
CCDC171Q6TFL3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
CCDC171Q6TFL3 SCARNA15.2-201ENST00000516409 127 ntBASIC1.24□□□□□ -2.21
CCDC171Q6TFL3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.24□□□□□ -2.21
CCDC171Q6TFL3 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC1.24□□□□□ -2.21
CCDC171Q6TFL3 AC124947.2-202ENST00000552735 133 ntBASIC1.24□□□□□ -2.21
CCDC171Q6TFL3 RN7SL622P-201ENST00000585292 275 ntBASIC1.24□□□□□ -2.21
CCDC171Q6TFL3 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC1.24□□□□□ -2.21
CCDC171Q6TFL3 AL031274.2-201ENST00000599419 203 ntBASIC1.24□□□□□ -2.21
CCDC171Q6TFL3 AP001485.1-201ENST00000604799 199 ntBASIC1.24□□□□□ -2.21
CCDC171Q6TFL3 AC007349.4-201ENST00000608114 532 ntBASIC1.24□□□□□ -2.21
CCDC171Q6TFL3 AL445493.3-201ENST00000619568 477 ntBASIC1.24□□□□□ -2.21
CCDC171Q6TFL3 AC024581.2-201ENST00000619986 252 ntBASIC1.24□□□□□ -2.21
CCDC171Q6TFL3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.24□□□□□ -2.21
CCDC171Q6TFL3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.24□□□□□ -2.21
CCDC171Q6TFL3 ENSAP3-201ENST00000312710 333 ntBASIC1.23□□□□□ -2.21
CCDC171Q6TFL3 Y_RNA.122-201ENST00000363331 96 ntBASIC1.23□□□□□ -2.21
CCDC171Q6TFL3 RNU6-1339P-201ENST00000363574 91 ntBASIC1.23□□□□□ -2.21
CCDC171Q6TFL3 Y_RNA.796-201ENST00000364268 102 ntBASIC1.23□□□□□ -2.21
CCDC171Q6TFL3 Y_RNA.799-201ENST00000364992 102 ntBASIC1.23□□□□□ -2.21
CCDC171Q6TFL3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
CCDC171Q6TFL3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
CCDC171Q6TFL3 Z86062.1-201ENST00000406773 777 ntBASIC1.23□□□□□ -2.21
CCDC171Q6TFL3 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.23□□□□□ -2.21
CCDC171Q6TFL3 AL512637.2-201ENST00000431287 1256 ntBASIC1.23□□□□□ -2.21
CCDC171Q6TFL3 Z82210.1-201ENST00000440037 231 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms